RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 H3BTX0 84 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 GNRH2O43555 120 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 OR5G3P0C626 314 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 FCGR1AP12314 374 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 TMEM78Q5T7P6 136 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 CYP2G1PQ6ZSU1 146 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
CCDC178-209ENST00000579947 RNASE11Q8TAA1 199 aaKnown RBP3.32□□□□□ -1.88
CCDC178-209ENST00000579947 WDR83OSQ9Y284 106 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 L7N2F9 121 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 TYMSP04818 313 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 REG3AQ06141 175 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 C9orf116Q5BN46 136 aaPredicted RBP3.32□□□□□ -1.88
CCDC178-209ENST00000579947 LAIR2Q6ISS4 152 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 PATE2Q6UY27 113 aa3.32□□□□□ -1.88
CCDC178-209ENST00000579947 ANP32BQ92688 251 aaKnown RBP3.32□□□□□ -1.88
CCDC178-209ENST00000579947 H3BQ15 152 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 SNRPCP09234 159 aaKnown RBP3.31□□□□□ -1.88
CCDC178-209ENST00000579947 HIST1H1EP10412 219 aaKnown RBP3.31□□□□□ -1.88
CCDC178-209ENST00000579947 TRAM1Q15629 374 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 OR2G3Q8NGZ4 309 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 LOC107984640A0A0U1RRK4 108 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 RHODO00212 210 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 TAS2R46P59540 309 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 RBX1P62877 108 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 UFSP1Q6NVU6 142 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 DTD1Q8TEA8 209 aa3.31□□□□□ -1.88
CCDC178-209ENST00000579947 M0R3E3 92 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 PMP2P02689 132 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 MT2AP02795 61 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 LINC00869P0C866 280 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 STAG3L3P0CL85 134 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 PXDC1Q5TGL8 231 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 C3orf85A0A1B0GTC6 90 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 UBE2D3P61077 147 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 UBE2D2P62837 147 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 ZNF506Q5JVG8 444 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 TMEM18Q96B42 140 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 ZNF486Q96H40 463 aaPredicted RBP3.3□□□□□ -1.88
CCDC178-209ENST00000579947 CARD19Q96LW7 228 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 LOC100130705A0A1B0GUX0 176 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 ZNF861PO60384 105 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 SELENOTP62341 195 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 RAB11AP62491 216 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 EIF5AL1Q6IS14 154 aaKnown RBP3.3□□□□□ -1.88
CCDC178-209ENST00000579947 OR2T35Q8NGX2 323 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 RAB2BQ8WUD1 216 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 RBKSQ9H477 322 aa3.3□□□□□ -1.88
CCDC178-209ENST00000579947 TRAV1-2A0A0B4J238 106 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 IL5P05113 134 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 HERV-K104P63124 156 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 RPL18AQ02543 176 aaKnown RBP3.29□□□□□ -1.88
CCDC178-209ENST00000579947 GAGE2BQ13066 116 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 IFT46Q9NQC8 304 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 IGKV2-40A0A087WW87 121 aaPredicted RBP3.29□□□□□ -1.88
CCDC178-209ENST00000579947 GAGE12HA6NDE8 117 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 H0Y8G0 127 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 IGKV2D-40P01614 121 aaPredicted RBP3.29□□□□□ -1.88
CCDC178-209ENST00000579947 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 LINC00242Q5T6M2 205 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 AHSA2Q719I0 299 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 CHCHD5Q9BSY4 110 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 NAGKQ9UJ70 344 aa3.29□□□□□ -1.88
CCDC178-209ENST00000579947 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 TRAV18A0A075B6X5 111 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 A8MWV9 139 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 NDUFB4O95168 129 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 PTTG1O95997 202 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 FGF6P10767 208 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 PGAM2P15259 253 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 LINC00305Q7Z4B0 112 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 POMPQ9Y244 141 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 AP4S1Q9Y587 144 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 A0A0A6YYH2 397 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 A6NJ64 397 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 S100A9P06702 114 aaKnown RBP3.28□□□□□ -1.88
CCDC178-209ENST00000579947 AKR1C1Q04828 323 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 UFD1Q92890 307 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 ARL6Q9H0F7 186 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 COMMD3Q9UBI1 195 aa3.28□□□□□ -1.88
CCDC178-209ENST00000579947 LSM2Q9Y333 95 aaKnown RBP3.28□□□□□ -1.88
CCDC178-209ENST00000579947 K7EPK0 472 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 GYG2O15488 501 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 CDS2O95674 445 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 PIGPP57054 158 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 FAM229BQ4G0N7 80 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 OR11H4Q8NGC9 324 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 CYGBQ8WWM9 190 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 MND1Q9BWT6 205 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 TEX46H3BTG2 121 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 SULT1A3P0DMM9 295 aa3.27□□□□□ -1.89
CCDC178-209ENST00000579947 SULT1A4P0DMN0 295 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms