RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
RPAIN-216ENST00000575599 Q6ZQT7 251 aa9.39□□□□□ -0.91
RPAIN-216ENST00000575599 CLRN3Q8NCR9 226 aa9.39□□□□□ -0.91
RPAIN-216ENST00000575599 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
RPAIN-216ENST00000575599 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
RPAIN-216ENST00000575599 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
RPAIN-216ENST00000575599 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
RPAIN-216ENST00000575599 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
RPAIN-216ENST00000575599 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
RPAIN-216ENST00000575599 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 K7EN84 100 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 PPP1R2P9O14990 202 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 P01737 135 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 RHEBQ15382 184 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
RPAIN-216ENST00000575599 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 RPS10P5Q9NQ39 176 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 IGHV1OR15-1A0A075B7D0 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 F5H768 121 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
RPAIN-216ENST00000575599 SH2D1AO60880 128 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GAGE7O76087 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 ATP5G1P05496 136 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
RPAIN-216ENST00000575599 TP53TG3Q9ULZ0 132 aa9.37□□□□□ -0.91
RPAIN-216ENST00000575599 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 ORM1P02763 201 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 ANXA2RQ3ZCQ2 193 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 MUC21Q5SSG8 566 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 FAM231DQ6ZW35 169 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 LINC00467Q9BRT7 94 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 NAGKQ9UJ70 344 aa9.36□□□□□ -0.91
RPAIN-216ENST00000575599 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
RPAIN-216ENST00000575599 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
RPAIN-216ENST00000575599 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-216ENST00000575599 RNF212Q495C1 297 aa9.35□□□□□ -0.91
RPAIN-216ENST00000575599 Q6ZTI0 123 aa9.35□□□□□ -0.91
RPAIN-216ENST00000575599 OR2D3Q8NGH3 330 aa9.35□□□□□ -0.91
RPAIN-216ENST00000575599 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 C19orf71A6NCJ1 209 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 CRIP1P50238 77 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
RPAIN-216ENST00000575599 DAZ2Q13117 558 aaKnown RBP9.34□□□□□ -0.91
RPAIN-216ENST00000575599 Q6AWC8 147 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 LINC00612Q8N6U2 182 aa9.34□□□□□ -0.91
RPAIN-216ENST00000575599 RPP21Q9H633 154 aaKnown RBP9.34□□□□□ -0.91
RPAIN-216ENST00000575599 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 P0DMU3 169 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 TCL1AP56279 114 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 LCE1DQ5T752 114 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 UBE2DNLQ8IWF7 75 aa9.33□□□□□ -0.92
RPAIN-216ENST00000575599 TRGV2A0A075B6R0 118 aa9.32□□□□□ -0.92
RPAIN-216ENST00000575599 A0A087WWC5 75 aa9.32□□□□□ -0.92
RPAIN-216ENST00000575599 A8MWL6 223 aa9.32□□□□□ -0.92
RPAIN-216ENST00000575599 S100PP25815 95 aa9.32□□□□□ -0.92
RPAIN-216ENST00000575599 KCNS1Q96KK3 526 aa9.32□□□□□ -0.92
RPAIN-216ENST00000575599 VPS13DQ5THJ4 4388 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 TMEM238LA0A1B0GVL6 79 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 NUDT3O95989 172 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
RPAIN-216ENST00000575599 CT83Q5H943 113 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 KCNIP4Q6PIL6 250 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 C15orf53Q8NAA6 179 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
RPAIN-216ENST00000575599 V9GYV3 84 aa9.31□□□□□ -0.92
RPAIN-216ENST00000575599 TRGV11A0A075B6L2 103 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 SPINK4O60575 86 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 HOXA5P20719 270 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 RPL19P84098 196 aaKnown RBP9.3□□□□□ -0.92
RPAIN-216ENST00000575599 ATRAIDQ6UW56 229 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 POM121L12Q8N7R1 296 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
RPAIN-216ENST00000575599 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 A0A0J9YY99 117 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 GRIFINA4D1Z8 144 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 ASIPP42127 132 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
RPAIN-216ENST00000575599 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms