RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TRGV1A0A0A0MS02 117 aa18.42■□□□□ 0.54
NME3-208ENST00000565379 RNASE3P12724 160 aaKnown RBP18.42■□□□□ 0.54
NME3-208ENST00000565379 ERVFC1-1P60608 527 aa18.42■□□□□ 0.54
NME3-208ENST00000565379 RASL10AQ92737 203 aa18.42■□□□□ 0.54
NME3-208ENST00000565379 TMEM218A2RU14 115 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 DEFB130BP0DP73 79 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 DEFB130AP0DP74 79 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 PIK3CD-AS1Q5SR53 167 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 RNASE7Q9H1E1 156 aaKnown RBP18.41■□□□□ 0.54
NME3-208ENST00000565379 RPP21Q9H633 154 aaKnown RBP18.41■□□□□ 0.54
NME3-208ENST00000565379 OSTCQ9NRP0 149 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 KMT2AQ03164 3969 aa18.41■□□□□ 0.54
NME3-208ENST00000565379 GRIFINA4D1Z8 144 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 NUPR2A6NF83 97 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 RPL19P84098 196 aaKnown RBP18.4■□□□□ 0.54
NME3-208ENST00000565379 PNRC1Q12796 327 aaPredicted RBP18.4■□□□□ 0.54
NME3-208ENST00000565379 ADIRFQ15847 76 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 ZNF575Q86XF7 245 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 C15orf54Q8N8G6 183 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 ISOC2Q96AB3 205 aa18.4■□□□□ 0.54
NME3-208ENST00000565379 GATCO43716 136 aaKnown RBP18.39■□□□□ 0.53
NME3-208ENST00000565379 ARMS2P0C7Q2 107 aa18.39■□□□□ 0.53
NME3-208ENST00000565379 CT83Q5H943 113 aa18.39■□□□□ 0.53
NME3-208ENST00000565379 Q6ZTI0 123 aa18.39■□□□□ 0.53
NME3-208ENST00000565379 PHLDA1Q8WV24 401 aaPredicted RBP18.39■□□□□ 0.53
NME3-208ENST00000565379 GAGE12BA1L429 117 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 H3BVH4 76 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 GAGE7O76087 117 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 GAGE12FP0CL80 117 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 GAGE12GP0CL81 117 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 GAGE12IP0CL82 117 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 Q6ZTC4 211 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 SCRT2Q9NQ03 307 aa18.38■□□□□ 0.53
NME3-208ENST00000565379 TRGV2A0A075B6R0 118 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 TRAV10A0A0B4J240 114 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 LY6G6CO95867 125 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 OR5AL1P0C617 328 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 SYT8Q8NBV8 401 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 SFRP2Q96HF1 295 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 MRPL16Q9NX20 251 aaKnown RBP18.37■□□□□ 0.53
NME3-208ENST00000565379 PHLDA3Q9Y5J5 127 aa18.37■□□□□ 0.53
NME3-208ENST00000565379 A0A1W2PPQ1 181 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 A8MWL6 223 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 SNAI2O43623 268 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 ATP5G1P05496 136 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 ZNF876PQ49A33 203 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 SSBP4Q9BWG4 385 aaPredicted RBP18.36■□□□□ 0.53
NME3-208ENST00000565379 SEC11CQ9BY50 192 aa18.36■□□□□ 0.53
NME3-208ENST00000565379 F8W036 122 aa18.35■□□□□ 0.53
NME3-208ENST00000565379 DNAH10Q8IVF4 4471 aa18.35■□□□□ 0.53
NME3-208ENST00000565379 F2Z2F3 143 aa18.34■□□□□ 0.53
NME3-208ENST00000565379 ZFP82Q8N141 532 aa18.34■□□□□ 0.53
NME3-208ENST00000565379 FER1L6-AS1Q8NA97 138 aa18.34■□□□□ 0.53
NME3-208ENST00000565379 OR10G8Q8NGN5 311 aa18.34■□□□□ 0.53
NME3-208ENST00000565379 CIDEAO60543 219 aa18.33■□□□□ 0.52
NME3-208ENST00000565379 IGLC6P0CF74 106 aa18.33■□□□□ 0.52
NME3-208ENST00000565379 DEFB131BA0A096LNP1 70 aa18.32■□□□□ 0.52
NME3-208ENST00000565379 FAM231BA6NCW3 169 aa18.32■□□□□ 0.52
NME3-208ENST00000565379 FRAS1Q86XX4 4008 aa18.31■□□□□ 0.52
NME3-208ENST00000565379 TRAV4A0A0B4J268 109 aa18.31■□□□□ 0.52
NME3-208ENST00000565379 GFRA4Q9GZZ7 299 aa18.31■□□□□ 0.52
NME3-208ENST00000565379 KLK5Q9Y337 293 aaPredicted RBP18.31■□□□□ 0.52
NME3-208ENST00000565379 A8MWV9 139 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 PPP1R2P9O14990 202 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 GZMBP10144 247 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 ADCYAP1P18509 176 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 CACNG7P62955 275 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 NDUFA5Q16718 116 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 WDR73Q6P4I2 378 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 TSKUQ8WUA8 353 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 DNAH6Q9C0G6 4158 aa18.3■□□□□ 0.52
NME3-208ENST00000565379 FOXA3P55318 350 aaPredicted RBP18.29■□□□□ 0.52
NME3-208ENST00000565379 SPANXN1Q5VSR9 72 aa18.29■□□□□ 0.52
NME3-208ENST00000565379 OR4C5Q8NGB2 326 aa18.29■□□□□ 0.52
NME3-208ENST00000565379 FAM210BQ96KR6 192 aa18.29■□□□□ 0.52
NME3-208ENST00000565379 V9GYV3 84 aa18.29■□□□□ 0.52
NME3-208ENST00000565379 NXPH4O95158 308 aa18.28■□□□□ 0.52
NME3-208ENST00000565379 C10orf91Q5T1B1 145 aa18.28■□□□□ 0.52
NME3-208ENST00000565379 DMRTA1Q5VZB9 504 aa18.28■□□□□ 0.52
NME3-208ENST00000565379 TPPP3Q9BW30 176 aa18.28■□□□□ 0.52
NME3-208ENST00000565379 M0R381 172 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 RS1O15537 224 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 MT-ND4LP03901 98 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 HTN3P15516 51 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 CTRLP40313 264 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 SLAQ13239 276 aa18.27■□□□□ 0.52
NME3-208ENST00000565379 F5H768 121 aa18.26■□□□□ 0.51
NME3-208ENST00000565379 OR10AG1Q8NH19 301 aa18.26■□□□□ 0.51
NME3-208ENST00000565379 ANAPC16Q96DE5 110 aa18.26■□□□□ 0.51
NME3-208ENST00000565379 CARHSP1Q9Y2V2 147 aaKnown RBP18.26■□□□□ 0.51
NME3-208ENST00000565379 IGHV4-4A0A075B6R2 117 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 TCTAP57738 103 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 CFAP126Q5VTH2 177 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 LYZL1Q6UWQ5 148 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 GTSF1Q8WW33 167 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 CNFNQ9BYD5 112 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 MUC4Q99102 2169 aa18.25■□□□□ 0.51
NME3-208ENST00000565379 ZFP2Q6ZN57 461 aa18.24■□□□□ 0.51
NME3-208ENST00000565379 RHODO00212 210 aa18.23■□□□□ 0.51
NME3-208ENST00000565379 POM121L12Q8N7R1 296 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms