RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 UQCRQO14949 82 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 HIST1H2BKO60814 126 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 CLPSP04118 112 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 IGKV1-16P04430 117 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 SLC25A5P05141 298 aaKnown RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 HIST1H2BJP06899 126 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 CD14P08571 375 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 PYYP10082 97 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 DEFA4P12838 97 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 IFITM1P13164 125 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 ARPP19P56211 112 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 C10orf111Q8N326 155 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 WFDC11Q8NEX6 87 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 TXNDC17Q9BRA2 123 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 MED9Q9NWA0 146 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 COMMD3Q9UBI1 195 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 TIMM9Q9Y5J7 89 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 CHCHD2Q9Y6H1 151 aaPredicted RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 CACNA1BQ00975 2339 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 LRRC37A2A6NM11 1700 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 PARP14Q460N5 1801 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 BAHCC1Q9P281 2608 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 ZNF705FA8MVS1 300 aaPredicted RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 H3BRN7 92 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 K7ERJ3 54 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 GEMIN2O14893 280 aaKnown RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 CD2P06729 351 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 TRGC1P0CF51 173 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 NFYAP23511 347 aaPredicted RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 SNRPD3P62318 126 aaKnown RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 ERHP84090 104 aaKnown RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 C6orf52Q5T4I8 152 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 C7orf65Q6ZTY9 151 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 DIRC1Q969H9 104 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 PRELID3AQ96N28 172 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 YPEL2Q96QA6 119 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 GINS4Q9BRT9 223 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 TTTY12Q9BZ98 90 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 NAA60Q9H7X0 242 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 ALPK3Q96L96 1907 aa1.12□□□□□ -2.23
CHD9-209ENST00000564255 AFDNP55196 1824 aaKnown RBP1.12□□□□□ -2.23
CHD9-209ENST00000564255 MUC6Q6W4X9 2439 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 ARAP2Q8WZ64 1704 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 EML6Q6ZMW3 1958 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 TRAV12-2A0A075B6T6 113 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 KLF7O75840 302 aaPredicted RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 FXYD2P54710 66 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 UBA52P62987 128 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 KLRD1Q13241 179 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 Q6AWC8 147 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 OR4B1Q8NGF8 309 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 MCEEQ96PE7 176 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 HIST1H2BLQ99880 126 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 PRO1933Q9H354 126 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 EPDR1Q9UM22 224 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 DNAJC15Q9Y5T4 150 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 TNRC18O15417 2968 aaPredicted RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 EDC4Q6P2E9 1401 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 HIVEP2P31629 2446 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 TRGV10A0A0A0MS01 117 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 M0R129 80 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 PITX3O75364 302 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 CRYGAP11844 174 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 HINT1P49773 126 aaPredicted RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 RPL26P61254 145 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 SUPT4H1P63272 117 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 LINC01545Q5VT33 79 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 MRPL54Q6P161 138 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 MIR17HGQ75NE6 70 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 KRTAP13-1Q8IUC0 172 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 HIST3H2BBQ8N257 126 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 KCNRGQ8N5I3 272 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 OTOSQ8NHW6 89 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 LINC00526Q96FQ7 95 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 SEC11CQ9BY50 192 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 NPCDR1Q9BY65 106 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 DPY30Q9C005 99 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 SLC35B3Q9H1N7 401 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 FKBP11Q9NYL4 201 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 RPL26L1Q9UNX3 145 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 KIAA0100Q14667 2235 aaKnown RBP1.11□□□□□ -2.23
CHD9-209ENST00000564255 PTPRBP23467 1997 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 UNC79Q9P2D8 2635 aa1.11□□□□□ -2.23
CHD9-209ENST00000564255 DDX60Q8IY21 1712 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 TRBV20-1A0A075B6N2 111 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 TCRBV3S1A0A5B6 114 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 M0R2P5 195 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 RER1O15258 196 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 MT-ND6P03923 174 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 DEFB103AP81534 67 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 Q56UQ5 140 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 CLLU1Q5K131 121 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 PATE2Q6UY27 113 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 Q6ZUT4 128 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 BPIFA4PQ86YQ2 179 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 SVBPQ8N300 66 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 LINC00471Q8N535 108 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 OR5AK2Q8NH90 309 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 COPS9Q8WXC6 57 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms