RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 SH3BGRL3Q9H299 93 aa11.22□□□□□ -0.61
CCNF-203ENST00000564236 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 Q5BKY6 102 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 MED28Q9H204 178 aa11.21□□□□□ -0.61
CCNF-203ENST00000564236 GCSHP23434 173 aa11.2□□□□□ -0.62
CCNF-203ENST00000564236 LAGE3Q14657 143 aa11.2□□□□□ -0.62
CCNF-203ENST00000564236 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
CCNF-203ENST00000564236 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
CCNF-203ENST00000564236 GTSF1LQ9H1H1 148 aa11.2□□□□□ -0.62
CCNF-203ENST00000564236 IGKV3D-20A0A0C4DH25 116 aa11.19□□□□□ -0.62
CCNF-203ENST00000564236 ZNF726P1Q15940 193 aa11.19□□□□□ -0.62
CCNF-203ENST00000564236 A8MWV9 139 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 OR10J3Q5JRS4 329 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
CCNF-203ENST00000564236 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 INO80EQ8NBZ0 244 aaPredicted RBP11.18□□□□□ -0.62
CCNF-203ENST00000564236 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 TMEM70Q9BUB7 260 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
CCNF-203ENST00000564236 PARLQ9H300 379 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 ARL2-SNX15V9GYD0 113 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
CCNF-203ENST00000564236 CTXND1A0A1B0GTU2 59 aa11.17□□□□□ -0.62
CCNF-203ENST00000564236 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
CCNF-203ENST00000564236 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
CCNF-203ENST00000564236 IL36BQ9NZH7 164 aa11.17□□□□□ -0.62
CCNF-203ENST00000564236 HERC1Q15751 4861 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 BORCS7-ASMTA0A0B4J1R7 106 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 PSCAO43653 123 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 Q5VSD8 79 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 Q6ZSN1 163 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 Q8N814 137 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 HIST1H2BAQ96A08 127 aa11.16□□□□□ -0.62
CCNF-203ENST00000564236 DNAH8Q96JB1 4490 aa11.15□□□□□ -0.62
CCNF-203ENST00000564236 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
CCNF-203ENST00000564236 PEX7O00628 323 aa11.15□□□□□ -0.62
CCNF-203ENST00000564236 Q86TA4 180 aa11.15□□□□□ -0.62
CCNF-203ENST00000564236 FRZBQ92765 325 aa11.15□□□□□ -0.62
CCNF-203ENST00000564236 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 G3V3Q6 166 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 C1QBP02746 253 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 ASIPP42127 132 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 TCEAL7Q9BRU2 100 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
CCNF-203ENST00000564236 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
CCNF-203ENST00000564236 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
CCNF-203ENST00000564236 CRIP1P50238 77 aa11.13□□□□□ -0.63
CCNF-203ENST00000564236 TM2D2Q9BX73 214 aa11.13□□□□□ -0.63
CCNF-203ENST00000564236 MYCBP2O75592 4640 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 A0A087WWC5 75 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 FXYD6-FXYD2A0A087WZ82 144 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 RHODO00212 210 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 IFNA7P01567 189 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 IGHV3-30P01768 117 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 IGHV3-30-3P0DP02 117 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 IGHV3-30-5P0DP03 117 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
CCNF-203ENST00000564236 OR2T35Q8NGX2 323 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 Q9HAA7 133 aa11.12□□□□□ -0.63
CCNF-203ENST00000564236 B4DEV8 164 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 FHITP49789 147 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
CCNF-203ENST00000564236 AKR1C8PQ5T2L2 129 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 ZC2HC1AQ96GY0 325 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 SAMD10Q9BYL1 202 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 Q9UF83 564 aa11.11□□□□□ -0.63
CCNF-203ENST00000564236 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
CCNF-203ENST00000564236 UBE2G2P60604 165 aa11.1□□□□□ -0.63
CCNF-203ENST00000564236 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
CCNF-203ENST00000564236 JPT2Q9H910 190 aa11.1□□□□□ -0.63
CCNF-203ENST00000564236 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
CCNF-203ENST00000564236 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 H3BVH4 76 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 SH2D1AO60880 128 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 LTAP01374 205 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 ARMS2P0C7Q2 107 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 GAGE1Q13065 139 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 GAGE4Q13068 117 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 GAGE5Q13069 117 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 TOR2AQ5JU69 321 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 FAM162BQ5T6X4 162 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 Q6ZSA8 131 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 Q8N3U1 123 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
CCNF-203ENST00000564236 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
CCNF-203ENST00000564236 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms