RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 GAGE12JA6NER3 117 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 LECT2O14960 151 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 UPK1BO75841 260 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 TCRAP04437 139 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 CDC34P49427 236 aaPredicted RBP13.86□□□□□ -0.19
HERC2-204ENST00000563945 ZNF80P51504 273 aaPredicted RBP13.86□□□□□ -0.19
HERC2-204ENST00000563945 GAGE1Q13065 139 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 GAGE4Q13068 117 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 GAGE5Q13069 117 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 LGALSLQ3ZCW2 172 aaPredicted RBP13.86□□□□□ -0.19
HERC2-204ENST00000563945 GAGE13Q4V321 117 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 DEFB104AQ8WTQ1 72 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 RMI2Q96E14 147 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 C11orf21Q9P2W6 132 aa13.86□□□□□ -0.19
HERC2-204ENST00000563945 PRNTQ86SH4 94 aa13.85□□□□□ -0.19
HERC2-204ENST00000563945 WFDC1Q9HC57 220 aa13.85□□□□□ -0.19
HERC2-204ENST00000563945 URGCP-MRPS24S4R325 110 aa13.85□□□□□ -0.19
HERC2-204ENST00000563945 A0A087WWC5 75 aa13.84□□□□□ -0.19
HERC2-204ENST00000563945 A8MWV9 139 aa13.84□□□□□ -0.19
HERC2-204ENST00000563945 FLI1Q01543 452 aaPredicted RBP13.84□□□□□ -0.19
HERC2-204ENST00000563945 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
HERC2-204ENST00000563945 ZFP2Q6ZN57 461 aa13.84□□□□□ -0.19
HERC2-204ENST00000563945 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
HERC2-204ENST00000563945 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.2
HERC2-204ENST00000563945 SEC11BP0C7V7 166 aa13.83□□□□□ -0.2
HERC2-204ENST00000563945 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
HERC2-204ENST00000563945 SUMO1P63165 101 aaKnown RBP13.83□□□□□ -0.2
HERC2-204ENST00000563945 WFDC2Q14508 124 aa13.83□□□□□ -0.2
HERC2-204ENST00000563945 DAZ4Q86SG3 579 aaKnown RBP13.83□□□□□ -0.2
HERC2-204ENST00000563945 OR2T35Q8NGX2 323 aa13.83□□□□□ -0.2
HERC2-204ENST00000563945 DAZ3Q9NR90 486 aaKnown RBP13.83□□□□□ -0.2
HERC2-204ENST00000563945 KRTAP29-1A8MX34 341 aaPredicted RBP13.82□□□□□ -0.2
HERC2-204ENST00000563945 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 Q6ZSA8 131 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 BAALCQ8WXS3 180 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 MARVELD1Q9BSK0 173 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 PARLQ9H300 379 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 EPDR1Q9UM22 224 aa13.82□□□□□ -0.2
HERC2-204ENST00000563945 RNASE3P12724 160 aaKnown RBP13.81□□□□□ -0.2
HERC2-204ENST00000563945 GCHFRP30047 84 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 Q8N3U1 123 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 CYB561D1Q8N8Q1 229 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 Q8N976 141 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 RAB24Q969Q5 203 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 TMEM167BQ9NRX6 74 aa13.81□□□□□ -0.2
HERC2-204ENST00000563945 MBP02144 154 aa13.8□□□□□ -0.2
HERC2-204ENST00000563945 ASIPP42127 132 aa13.8□□□□□ -0.2
HERC2-204ENST00000563945 PIK3CD-AS1Q5SR53 167 aa13.8□□□□□ -0.2
HERC2-204ENST00000563945 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
HERC2-204ENST00000563945 DEFA1P59665 94 aa13.79□□□□□ -0.2
HERC2-204ENST00000563945 DEFA3P59666 94 aa13.79□□□□□ -0.2
HERC2-204ENST00000563945 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
HERC2-204ENST00000563945 DNAH8Q96JB1 4490 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 IGKV2D-24A0A075B6R9 120 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 CXorf1O96002 111 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 IGLV2-11P01706 119 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 SYT8Q8NBV8 401 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 OR2G3Q8NGZ4 309 aa13.78□□□□□ -0.2
HERC2-204ENST00000563945 SUN5Q8TC36 379 aa13.77□□□□□ -0.21
HERC2-204ENST00000563945 ACTR3CQ9C0K3 210 aaPredicted RBP13.77□□□□□ -0.21
HERC2-204ENST00000563945 RHODO00212 210 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 IFNA7P01567 189 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 IFITM3Q01628 133 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 ELOBQ15370 118 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 SCXQ7RTU7 201 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 PSMG3Q9BT73 122 aaPredicted RBP13.76□□□□□ -0.21
HERC2-204ENST00000563945 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
HERC2-204ENST00000563945 A0A087WX48 190 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 B4DEV8 164 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 SERF2P84101 59 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 SERTAD4-AS1Q5TG53 156 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 C14orf178Q8N769 122 aaPredicted RBP13.75□□□□□ -0.21
HERC2-204ENST00000563945 LINC00479Q96M42 142 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 JPT2Q9H910 190 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 KLK12Q9UKR0 248 aa13.75□□□□□ -0.21
HERC2-204ENST00000563945 LINC00694P0DN24 101 aa13.74□□□□□ -0.21
HERC2-204ENST00000563945 ATP6V0CP27449 155 aa13.74□□□□□ -0.21
HERC2-204ENST00000563945 UBE2WQ96B02 151 aa13.74□□□□□ -0.21
HERC2-204ENST00000563945 IL36BQ9NZH7 164 aa13.74□□□□□ -0.21
HERC2-204ENST00000563945 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 DMRTA1Q5VZB9 504 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 NIT1Q86X76 327 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 CHAC1Q9BUX1 264 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 ARL2-SNX15V9GYD0 113 aa13.73□□□□□ -0.21
HERC2-204ENST00000563945 A0A1W2PRE2 83 aa13.72□□□□□ -0.21
HERC2-204ENST00000563945 H3BVH4 76 aa13.72□□□□□ -0.21
HERC2-204ENST00000563945 Q9UF83 564 aa13.72□□□□□ -0.21
HERC2-204ENST00000563945 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
HERC2-204ENST00000563945 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
HERC2-204ENST00000563945 ARMS2P0C7Q2 107 aa13.7□□□□□ -0.22
HERC2-204ENST00000563945 C14orf177Q52M58 125 aa13.7□□□□□ -0.22
HERC2-204ENST00000563945 UFSP1Q6NVU6 142 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms