RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 AP3S2P59780 193 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 ZNF266Q14584 549 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 IAH1Q2TAA2 248 aaPredicted RBP6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 GCSAMLQ5JQS6 135 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 Q6AWC8 147 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 NHLRC2Q8NBF2 726 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 C2orf50Q96LR7 162 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 SLC25A2Q9BXI2 301 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
HDGFL3-204ENST00000563790 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 H3BMQ9 156 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 TMBIM6P55061 237 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 BCL7BQ9BQE9 202 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 SRRQ9GZT4 340 aa6.26□□□□□ -1.41
HDGFL3-204ENST00000563790 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 CST7O76096 145 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 SCGB1D2O95969 90 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 ZNF138P52744 262 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 IL15RAQ13261 267 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 Q6ZRG5 221 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 TMEM75Q8N9X5 138 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 OR1L4Q8NGR5 311 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 MITD1Q8WV92 249 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 PFDN5Q99471 154 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 ARPC5LQ9BPX5 153 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 SPXQ9BT56 116 aa6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 MRPS26Q9BYN8 205 aaKnown RBP6.25□□□□□ -1.41
HDGFL3-204ENST00000563790 IGHV3-16A0A0C4DH30 117 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 CFC1P0CG37 223 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 LINC00694P0DN24 101 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 PYDC2Q56P42 97 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 TMEM78Q5T7P6 136 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 FXYD5Q96DB9 178 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 PHYHIPLQ96FC7 376 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 SDHCQ99643 169 aaPredicted RBP6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 UQCC1Q9NVA1 299 aa6.24□□□□□ -1.41
HDGFL3-204ENST00000563790 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 IGSF23A1L1A6 192 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 RBAKDNA6NC62 111 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 FAM24AA6NFZ4 105 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 GNRH2O43555 120 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 BAK1Q16611 211 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 MIR17HGQ75NE6 70 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 SLC25A29Q8N8R3 303 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 FER1L6-AS1Q8NA97 138 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 GSKIPQ9P0R6 139 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
HDGFL3-204ENST00000563790 UBE2L5PA0A1B0GUS4 154 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 M0R2P5 195 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 PFN1P07737 140 aaKnown RBP6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 NBEAP1P0C6P0 100 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 UBE2D1P51668 147 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 C12orf45Q8N5I9 185 aaPredicted RBP6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 STPG4Q8N801 248 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 OR4C5Q8NGB2 326 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 TVP23CQ96ET8 276 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 MLST8Q9BVC4 326 aa6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 LYRM2Q9NU23 88 aaPredicted RBP6.22□□□□□ -1.41
HDGFL3-204ENST00000563790 TRGV11A0A075B6L2 103 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 TYMSP04818 313 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 SEC11BP0C7V7 166 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 SULT1A1P50225 295 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 CAV2P51636 162 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 RAB31Q13636 194 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 CFAP126Q5VTH2 177 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 TMEM252Q8N6L7 170 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 DIRC1Q969H9 104 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 AAMDCQ9H7C9 122 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 Q9UF83 564 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 LENEPQ9Y5L5 61 aa6.21□□□□□ -1.42
HDGFL3-204ENST00000563790 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 OR10J4P0C629 311 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 FGF7P21781 194 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 BAXQ07812 192 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 MAJINQ3KP22 176 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 TMED6Q8WW62 240 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 C20orf85Q9H1P6 137 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 OR51M1Q9H341 326 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 C11orf21Q9P2W6 132 aa6.2□□□□□ -1.42
HDGFL3-204ENST00000563790 NAP1L6A6NFF2 107 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 S100A11P31949 105 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 UBE2WQ96B02 151 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 C1orf43Q9BWL3 253 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 LSM5Q9Y4Y9 91 aaKnown RBP6.19□□□□□ -1.42
HDGFL3-204ENST00000563790 FBLL1A6NHQ2 334 aaKnown RBP6.18□□□□□ -1.42
HDGFL3-204ENST00000563790 TCRBP04435 133 aa6.18□□□□□ -1.42
HDGFL3-204ENST00000563790 RHOHQ15669 191 aa6.18□□□□□ -1.42
HDGFL3-204ENST00000563790 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
HDGFL3-204ENST00000563790 C9orf85Q96MD7 179 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms