RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 HTN1P15515 57 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
SMG1-208ENST00000563448 KIR2DL5AQ8N109 375 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 KIR2DL5BQ8NHK3 375 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 TMEM208Q9BTX3 173 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 SCRT2Q9NQ03 307 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 GOLT1BQ9Y3E0 138 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
SMG1-208ENST00000563448 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 F2Z2F3 143 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 AZU1P20160 251 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 APOC4P55056 127 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 ZNF705AQ6ZN79 300 aaPredicted RBP7.37□□□□□ -1.23
SMG1-208ENST00000563448 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 OR10AG1Q8NH19 301 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
SMG1-208ENST00000563448 PRB2P02812 416 aaPredicted RBP7.36□□□□□ -1.23
SMG1-208ENST00000563448 RPS10P46783 165 aaKnown RBP7.36□□□□□ -1.23
SMG1-208ENST00000563448 FABP9Q0Z7S8 132 aa7.36□□□□□ -1.23
SMG1-208ENST00000563448 MSRB1Q9NZV6 116 aa7.36□□□□□ -1.23
SMG1-208ENST00000563448 NTF3P20783 257 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 CAMPP49913 170 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 HBBP68871 147 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 RIGQ13278 110 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 WDR73Q6P4I2 378 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 TMEM136Q6ZRR5 245 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 ZFP82Q8N141 532 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 C11orf72Q8NBR9 251 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 IGHV4-4A0A075B6R2 117 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 TWIST1Q15672 202 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 LBHQ53QV2 105 aaPredicted RBP7.35□□□□□ -1.23
SMG1-208ENST00000563448 RASL11AQ6T310 242 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 PHLDA3Q9Y5J5 127 aa7.35□□□□□ -1.23
SMG1-208ENST00000563448 SNURFLB1AK76 121 aa7.34□□□□□ -1.23
SMG1-208ENST00000563448 CACNG7P62955 275 aa7.34□□□□□ -1.23
SMG1-208ENST00000563448 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
SMG1-208ENST00000563448 SPANXN1Q5VSR9 72 aa7.34□□□□□ -1.23
SMG1-208ENST00000563448 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
SMG1-208ENST00000563448 RNASE8Q8TDE3 154 aaKnown RBP7.34□□□□□ -1.23
SMG1-208ENST00000563448 A0A1B0GW15 77 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 K7EIL1 84 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 RAB4BP61018 213 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 ZNF415Q09FC8 603 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 COX19Q49B96 90 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 DMRTA1Q5VZB9 504 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 X6R8D5 127 aa7.34□□□□□ -1.24
SMG1-208ENST00000563448 M0R381 172 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 NXPH4O95158 308 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 TRGC2P03986 189 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 S100A2P29034 98 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 DEFA6Q01524 100 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 ZNF493Q6ZR52 646 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 IL17DQ8TAD2 202 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
SMG1-208ENST00000563448 TRAPPC1Q9Y5R8 145 aa7.33□□□□□ -1.24
SMG1-208ENST00000563448 PLAC8L1A1L4L8 177 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 PHOX2AO14813 284 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 RCHY1Q96PM5 261 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
SMG1-208ENST00000563448 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 MT-ND6P03923 174 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
SMG1-208ENST00000563448 HOXA5P20719 270 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 Q6ZWC4 215 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 RNF183Q96D59 192 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 C16orf74Q96GX8 76 aa7.32□□□□□ -1.24
SMG1-208ENST00000563448 EVI2AP22794 236 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 SLAQ13239 276 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 FRZBQ92765 325 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 SPXQ9BT56 116 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 TMEM191AQ9H0A3 160 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 JPT2Q9H910 190 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
SMG1-208ENST00000563448 SMIM9A6NGZ8 99 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 M0R2P5 195 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 SYT8Q8NBV8 401 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 OR11H2Q8NH07 326 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 PTH2Q96A98 100 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 APCSP02743 223 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 TRGC1P0CF51 173 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 KIAA1644Q3SXP7 199 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 ZNF876PQ49A33 203 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 AMN1Q8IY45 258 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
SMG1-208ENST00000563448 MRPL16Q9NX20 251 aaKnown RBP7.3□□□□□ -1.24
SMG1-208ENST00000563448 MGAM2Q2M2H8 2515 aa7.29□□□□□ -1.24
SMG1-208ENST00000563448 DEFB121Q5J5C9 76 aa7.29□□□□□ -1.24
SMG1-208ENST00000563448 C14orf178Q8N769 122 aaPredicted RBP7.29□□□□□ -1.24
SMG1-208ENST00000563448 OVOL2Q9BRP0 275 aa7.29□□□□□ -1.24
SMG1-208ENST00000563448 RETNQ9HD89 108 aa7.29□□□□□ -1.24
SMG1-208ENST00000563448 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
SMG1-208ENST00000563448 RAB4AP20338 218 aa7.28□□□□□ -1.24
SMG1-208ENST00000563448 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
SMG1-208ENST00000563448 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms