RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 PPT1P50897 306 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 NAGKQ9UJ70 344 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 ARL2-SNX15V9GYD0 113 aa11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 C9JCJ5 164 aa11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.61
HDGFL3-203ENST00000563404 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
HDGFL3-203ENST00000563404 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
HDGFL3-203ENST00000563404 M0R2P5 195 aa11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 TYMSP04818 313 aa11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 RPH3ALQ9UNE2 315 aa11.25□□□□□ -0.61
HDGFL3-203ENST00000563404 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
HDGFL3-203ENST00000563404 PGPA6NDG6 321 aa11.24□□□□□ -0.61
HDGFL3-203ENST00000563404 F6UZH7 168 aa11.24□□□□□ -0.61
HDGFL3-203ENST00000563404 TIRAPP58753 221 aa11.24□□□□□ -0.61
HDGFL3-203ENST00000563404 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
HDGFL3-203ENST00000563404 IGLV5-52A0A0A0MRZ9 124 aa11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 TRAV8-1A0A0A6YYK1 113 aa11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 GOLT1AQ6ZVE7 132 aa11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
HDGFL3-203ENST00000563404 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
HDGFL3-203ENST00000563404 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
HDGFL3-203ENST00000563404 GNG5P63218 68 aa11.22□□□□□ -0.61
HDGFL3-203ENST00000563404 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
HDGFL3-203ENST00000563404 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 FAM74A7A6NL05 159 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 PSCAO43653 123 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 Q8N814 137 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 CMTM2Q8TAZ6 248 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 NTN5Q8WTR8 489 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 TMEM70Q9BUB7 260 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.61
HDGFL3-203ENST00000563404 FAM229AH3BQW9 127 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 SUMO1P63165 101 aaKnown RBP11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 CCL20P78556 96 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 C5orf17Q8NAS9 161 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 Q9HAA7 133 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
HDGFL3-203ENST00000563404 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 RS1O15537 224 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IFNA1P01562 189 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 Q6ZSN1 163 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 HIST1H2BAQ96A08 127 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 EPDR1Q9UM22 224 aa11.19□□□□□ -0.62
HDGFL3-203ENST00000563404 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 GGTLC3B5MD39 225 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 RAB14P61106 215 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 IFITM2Q01629 132 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 WFDC2Q14508 124 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 OR10J3Q5JRS4 329 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 KCNS1Q96KK3 526 aa11.18□□□□□ -0.62
HDGFL3-203ENST00000563404 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
HDGFL3-203ENST00000563404 PAGE4O60829 102 aa11.17□□□□□ -0.62
HDGFL3-203ENST00000563404 Q8N3U1 123 aa11.17□□□□□ -0.62
HDGFL3-203ENST00000563404 GNG13Q9P2W3 67 aa11.17□□□□□ -0.62
HDGFL3-203ENST00000563404 TRBV6-4A0A1B0GX49 114 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 K7EQM0 130 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 TCRAP04437 139 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 UBE2G2P60604 165 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 RHOHQ15669 191 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 LELP1Q5T871 98 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 TMEM75Q8N9X5 138 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
HDGFL3-203ENST00000563404 A0A1B0GV50 99 aa11.15□□□□□ -0.62
HDGFL3-203ENST00000563404 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
HDGFL3-203ENST00000563404 BCL2P10415 239 aa11.15□□□□□ -0.62
HDGFL3-203ENST00000563404 CLLU1Q5K131 121 aa11.15□□□□□ -0.62
HDGFL3-203ENST00000563404 PDE6DO43924 150 aa11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 S100A9P06702 114 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-203ENST00000563404 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms