RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TRBV30A0A0K0K1B3 111 aa7□□□□□ -1.29
CDH1-205ENST00000562836 PIGYQ3MUY2 71 aa7□□□□□ -1.29
CDH1-205ENST00000562836 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
CDH1-205ENST00000562836 Q6ZVQ6 151 aa7□□□□□ -1.29
CDH1-205ENST00000562836 NACAE9PAV3 2078 aa7□□□□□ -1.29
CDH1-205ENST00000562836 IGKV1D-42A0A075B6H8 117 aa7□□□□□ -1.29
CDH1-205ENST00000562836 TMEM223A0PJW6 202 aa7□□□□□ -1.29
CDH1-205ENST00000562836 DEFB134Q4QY38 66 aa7□□□□□ -1.29
CDH1-205ENST00000562836 UBE2D4Q9Y2X8 147 aa7□□□□□ -1.29
CDH1-205ENST00000562836 IBA57-AS1B1ANH7 110 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 FUSP35637 526 aaKnown RBP eCLIP6.99□□□□□ -1.29
CDH1-205ENST00000562836 LINC01356Q8N9X3 169 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 CTSZQ9UBR2 303 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 COL4A2P08572 1712 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 ITLN1Q8WWA0 313 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 VSIG2Q96IQ7 327 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 C5orf42Q9H799 3197 aa6.99□□□□□ -1.29
CDH1-205ENST00000562836 MUC22E2RYF6 1773 aaPredicted RBP6.99□□□□□ -1.29
CDH1-205ENST00000562836 RANBP2P49792 3224 aaKnown RBP6.99□□□□□ -1.29
CDH1-205ENST00000562836 IGHV1OR21-1A0A087WYE8 117 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 M0R135 149 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 U3KQK5 164 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 ARHGAP32A7KAX9 2087 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 NXPH4O95158 308 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 CKS2P33552 79 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 LAGE3Q14657 143 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 Q6JHZ5 121 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 PRNTQ86SH4 94 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 UNC80Q8N2C7 3258 aa6.98□□□□□ -1.29
CDH1-205ENST00000562836 LINC00473A8K010 186 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 PSPHP1O15172 72 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 ESRGQ1W209 222 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 TMEM30BQ3MIR4 351 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 C14orf178Q8N769 122 aaPredicted RBP6.97□□□□□ -1.29
CDH1-205ENST00000562836 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 MRPL51Q4U2R6 128 aaKnown RBP6.97□□□□□ -1.29
CDH1-205ENST00000562836 COL5A1P20908 1838 aaPredicted RBP6.97□□□□□ -1.29
CDH1-205ENST00000562836 KNTC1P50748 2209 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 EPOPA6NHQ4 379 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 COX6CP09669 75 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 COX6B1P14854 86 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 LCA10Q71F78 164 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 DEC1Q9P2X7 70 aa6.97□□□□□ -1.29
CDH1-205ENST00000562836 UNC13CQ8NB66 2214 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 TFF1P04155 84 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
CDH1-205ENST00000562836 SPRR3Q9UBC9 169 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 ICOSQ9Y6W8 199 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 ADAMTS20P59510 1910 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 IGKV1-6A0A0C4DH72 117 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 F8VRH5 84 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
CDH1-205ENST00000562836 HOXA4Q00056 320 aaPredicted RBP6.96□□□□□ -1.3
CDH1-205ENST00000562836 DAND5Q8N907 189 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 SPTSSBQ8NFR3 76 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 FLVCR1-AS1Q8TAF5 88 aa6.96□□□□□ -1.3
CDH1-205ENST00000562836 UBALD1Q8TB05 177 aa6.95□□□□□ -1.3
CDH1-205ENST00000562836 NOTCH4Q99466 2003 aa6.95□□□□□ -1.3
CDH1-205ENST00000562836 XIRP2A4UGR9 3374 aa6.95□□□□□ -1.3
CDH1-205ENST00000562836 PLGLAQ15195 96 aa6.95□□□□□ -1.3
CDH1-205ENST00000562836 DOCK10Q96BY6 2186 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 CHD7Q9P2D1 2997 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 C10orf142B7Z368 130 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 RPL11P62913 178 aaKnown RBP6.94□□□□□ -1.3
CDH1-205ENST00000562836 DNAJC13O75165 2243 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 LINC00313P59037 77 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
CDH1-205ENST00000562836 WFDC9Q8NEX5 89 aa6.94□□□□□ -1.3
CDH1-205ENST00000562836 H0YGG7 62 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 WISP2O76076 250 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 UBE2BP63146 152 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 DEFB103AP81534 67 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 COL6A3P12111 3177 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 C5orf67F2Z3F1 127 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 BLCAPP62952 87 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 SZT2Q5T011 3432 aa6.93□□□□□ -1.3
CDH1-205ENST00000562836 LRCOL1A6NCL2 159 aa6.92□□□□□ -1.3
CDH1-205ENST00000562836 COX7A2LO14548 114 aa6.92□□□□□ -1.3
CDH1-205ENST00000562836 RPS21P63220 83 aaKnown RBP6.92□□□□□ -1.3
CDH1-205ENST00000562836 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
CDH1-205ENST00000562836 ESM1Q9NQ30 184 aa6.92□□□□□ -1.3
CDH1-205ENST00000562836 LTBP2Q14767 1821 aa6.92□□□□□ -1.3
CDH1-205ENST00000562836 KIAA0100Q14667 2235 aaKnown RBP6.92□□□□□ -1.3
CDH1-205ENST00000562836 ITLN2Q8WWU7 325 aaPredicted RBP6.92□□□□□ -1.3
CDH1-205ENST00000562836 EYSQ5T1H1 3165 aa6.92□□□□□ -1.3
CDH1-205ENST00000562836 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
CDH1-205ENST00000562836 BUB1B-PAK6H3BSN5 160 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 LINC00846Q9NV44 126 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
CDH1-205ENST00000562836 IGHV5-10-1A0A0J9YXX1 117 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms