RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 OSTCQ9NRP0 149 aa2.17□□□□□ -2.06
SMG1-204ENST00000561940 SRRM2Q9UQ35 2752 aaKnown RBP2.17□□□□□ -2.06
SMG1-204ENST00000561940 SCN3AQ9NY46 2000 aa2.17□□□□□ -2.06
SMG1-204ENST00000561940 DNAH9Q9NYC9 4486 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 IGLV3-32A0A0A0MS00 114 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 CCL22O00626 93 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 OR5F1O95221 314 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 CLPSP04118 112 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 UBBP0CG47 229 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 RPL22P35268 128 aaKnown RBP2.16□□□□□ -2.06
SMG1-204ENST00000561940 PLCXD2Q0VAA5 305 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 Q1T7F1 81 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 SPANXN5Q5MJ07 72 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 NAA38Q9BRA0 125 aaKnown RBP2.16□□□□□ -2.06
SMG1-204ENST00000561940 ARMC1Q9NVT9 282 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 NHP2Q9NX24 153 aaKnown RBP2.16□□□□□ -2.06
SMG1-204ENST00000561940 LHFPL6Q9Y693 200 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 DSPPQ9NZW4 1301 aa2.16□□□□□ -2.06
SMG1-204ENST00000561940 FLG2Q5D862 2391 aaPredicted RBP2.15□□□□□ -2.06
SMG1-204ENST00000561940 MRPL33O75394 65 aaKnown RBP2.15□□□□□ -2.07
SMG1-204ENST00000561940 GLRXP35754 106 aa2.15□□□□□ -2.07
SMG1-204ENST00000561940 RHEBQ15382 184 aa2.15□□□□□ -2.07
SMG1-204ENST00000561940 HACD4Q5VWC8 232 aa2.15□□□□□ -2.07
SMG1-204ENST00000561940 FP248Q71RG6 208 aaPredicted RBP2.15□□□□□ -2.07
SMG1-204ENST00000561940 Q8N2B8 174 aa2.15□□□□□ -2.07
SMG1-204ENST00000561940 MED11Q9P086 117 aa2.15□□□□□ -2.07
SMG1-204ENST00000561940 A0A087X0T9 212 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 CYB5BO43169 146 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 KDELR1P24390 212 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 HSPE1P61604 102 aaKnown RBP2.14□□□□□ -2.07
SMG1-204ENST00000561940 CCL8P80075 99 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 NNATQ16517 81 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 DHRS4L2Q6PKH6 230 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 GOLT1AQ6ZVE7 132 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 LCA10Q71F78 164 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 S100A7AQ86SG5 101 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 SERPINI1Q99574 410 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 EPDR1Q9UM22 224 aa2.14□□□□□ -2.07
SMG1-204ENST00000561940 TRBV6-5A0A0K0K1A5 114 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 TCRBV4S1A1TA0A5B7 111 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 NUPR2A6NF83 97 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 E5RI56 91 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 SULT1B1O43704 296 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 INSL3P51460 131 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 RHOBP62745 196 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 ZNF826PQ6ZT77 177 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 TMED4Q7Z7H5 227 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 HEATR1Q9H583 2144 aaKnown RBP2.13□□□□□ -2.07
SMG1-204ENST00000561940 PYCARDQ9ULZ3 195 aa2.13□□□□□ -2.07
SMG1-204ENST00000561940 TRBV19A0A075B6N1 114 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 C7orf71A4D174 169 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 HMGB3O15347 200 aaKnown RBP2.12□□□□□ -2.07
SMG1-204ENST00000561940 IGF2P01344 180 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 IFNA7P01567 189 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 OR4E1P0C645 316 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 FKBP2P26885 142 aaKnown RBP2.12□□□□□ -2.07
SMG1-204ENST00000561940 POU6F1Q14863 301 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 OR52R1Q8NGF1 315 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 OR8D4Q8NGM9 314 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 AP3S1Q92572 193 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 HIST1H2BLQ99880 126 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 IMUPQ9GZP8 106 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 LYSTQ99698 3801 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 FRAS1Q86XX4 4008 aa2.12□□□□□ -2.07
SMG1-204ENST00000561940 C1orf196B1AJZ1 125 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 SHBGP04278 402 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 PRB4P10163 310 aaPredicted RBP2.11□□□□□ -2.07
SMG1-204ENST00000561940 SERPINB1P30740 379 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 EIF5AP63241 154 aaKnown RBP2.11□□□□□ -2.07
SMG1-204ENST00000561940 RPL19P84098 196 aaKnown RBP2.11□□□□□ -2.07
SMG1-204ENST00000561940 Q6ZQT0 140 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 ZHX1-C8orf76Q96EF9 292 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 TAS2R4Q9NYW5 299 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 OR5AC2Q9NZP5 309 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 ASB4Q9Y574 426 aa2.11□□□□□ -2.07
SMG1-204ENST00000561940 CSMD3Q7Z407 3707 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 TRAV4A0A0B4J268 109 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 CST8O60676 142 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 PROSCO94903 275 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 CTSDP07339 412 aaPredicted RBP2.1□□□□□ -2.07
SMG1-204ENST00000561940 CRYGAP11844 174 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 SPI1P17947 270 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 SSR2P43308 183 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 SERPINB9P50453 376 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 PIGPP57054 158 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 TCTAP57738 103 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 DEFA3P59666 94 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 KRR1Q13601 381 aaKnown RBP2.1□□□□□ -2.07
SMG1-204ENST00000561940 PDZD9Q8IXQ8 264 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 C10orf82Q8WW14 230 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 EFCAB11Q9BUY7 163 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 SLC35A3Q9Y2D2 325 aa2.1□□□□□ -2.07
SMG1-204ENST00000561940 TMEM212A6NML5 194 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 AIPO00170 330 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 ATG12O94817 140 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 NDUFC2O95298 119 aa2.09□□□□□ -2.07
SMG1-204ENST00000561940 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms