RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LECT2O14960 151 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 Q96MF0 132 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 C9orf66Q5T8R8 295 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 C10orf105Q8TEF2 133 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 MST1P26927 711 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 FXYD5Q96DB9 178 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 GNRH2O43555 120 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV3-30P01768 117 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV3-33P01772 117 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV3-30-3P0DP02 117 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV3-30-5P0DP03 117 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
CSPG4P12-202ENST00000559989 WNK2Q9Y3S1 2297 aa10.93□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
CSPG4P12-202ENST00000559989 COX7BP24311 80 aa10.93□□□□□ -0.66
CSPG4P12-202ENST00000559989 QRFPP83859 136 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 G3V318 75 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 WFDC2Q14508 124 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 CSRP1P21291 193 aaKnown RBP10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGLV2-23P01705 113 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 ZNF407Q9C0G0 2248 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 F8W735 103 aaPredicted RBP10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 C10orf91Q5T1B1 145 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 CLEC2BQ92478 149 aa10.92□□□□□ -0.66
CSPG4P12-202ENST00000559989 WISP1O95388 367 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 PRR30Q53SZ7 412 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 GPHB5Q86YW7 130 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 RLFQ13129 1914 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 CCL24O00175 119 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 Q6ZRM9 215 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 NPBQ8NG41 125 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGLV3-19P01714 112 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 COL24A1Q17RW2 1714 aa10.91□□□□□ -0.66
CSPG4P12-202ENST00000559989 ELANEP08246 267 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 NCOR1O75376 2440 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 SPTBN1Q01082 2364 aaKnown RBP10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 E7EQL1 145 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 RETNQ9HD89 108 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 ADAMTS7Q9UKP4 1686 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P12-202ENST00000559989 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
CSPG4P12-202ENST00000559989 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
CSPG4P12-202ENST00000559989 PLXNA2O75051 1894 aa10.89□□□□□ -0.67
CSPG4P12-202ENST00000559989 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
CSPG4P12-202ENST00000559989 TRBV7-3A0A075B6L6 115 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 LYPD6Q86Y78 171 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 IGLV3-9A0A075B6K5 115 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 FAM186AA6NE01 2351 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 FAM120AOSQ5T036 256 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 C20orf197Q8N268 126 aa10.88□□□□□ -0.67
CSPG4P12-202ENST00000559989 SP5Q6BEB4 398 aaPredicted RBP10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 FRMPD3Q5JV73 1810 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 C5orf24Q7Z6I8 188 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 TOMM6Q96B49 74 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 C11orf86A6NJI1 115 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 WFDC10BQ8IUB3 73 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 DAND5Q8N907 189 aa10.87□□□□□ -0.67
CSPG4P12-202ENST00000559989 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 ZNF726P1Q15940 193 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 Q8N1Y9 231 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 Q8TCH9 128 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 K7EN84 100 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 Q0VFX4 171 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 ASPHD1Q5U4P2 390 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 LINC00311Q8N616 119 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 NHSL1Q5SYE7 1610 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 SIPA1L1O43166 1804 aa10.86□□□□□ -0.67
CSPG4P12-202ENST00000559989 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 E9PLD3 99 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 CSRP3P50461 194 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 LY6HO94772 140 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 PIK3CD-AS1Q5SR53 167 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 TICRRQ7Z2Z1 1910 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 LMO1P25800 156 aa10.85□□□□□ -0.67
CSPG4P12-202ENST00000559989 TANC2Q9HCD6 1990 aa10.84□□□□□ -0.67
CSPG4P12-202ENST00000559989 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
CSPG4P12-202ENST00000559989 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
CSPG4P12-202ENST00000559989 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
CSPG4P12-202ENST00000559989 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
CSPG4P12-202ENST00000559989 PIFOQ8TCI5 191 aa10.83□□□□□ -0.67
CSPG4P12-202ENST00000559989 CD59P13987 128 aa10.83□□□□□ -0.68
CSPG4P12-202ENST00000559989 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
CSPG4P12-202ENST00000559989 IGKV1-6A0A0C4DH72 117 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms