RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 IGHV3-30-3P0DP02 117 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 IGHV3-30-5P0DP03 117 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 AKR1C4P17516 323 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 CXCL3P19876 107 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 M6PRP20645 277 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 S100GP29377 79 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 ASIPP42127 132 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 SUB1P53999 127 aaKnown RBP eCLIP1.49□□□□□ -2.17
SCFD1-219ENST00000556413 GABARAPL2P60520 117 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 SPCS3P61009 180 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 YPEL3P61236 119 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-219ENST00000556413 CACNG7P62955 275 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 SYCNQ0VAF6 134 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 TTC32Q5I0X7 151 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 SPATA31B1PQ5VZV4 182 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM144Q7Z5S9 345 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 LHFPL1Q86WI0 220 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 LGI3Q8N145 548 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 OR8A1Q8NGG7 326 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 OR1S1Q8NH92 325 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 Q8TAT8 98 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 RXFP4Q8TDU9 374 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 YIPF6Q96EC8 236 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 S100A16Q96FQ6 103 aaKnown RBP1.49□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM147Q9BVK8 224 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM222Q9H0R3 208 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 MIXL1Q9H2W2 232 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 NAA60Q9H7X0 242 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 RPRMQ9NS64 109 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 MCUBQ9NWR8 336 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 NAGKQ9UJ70 344 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 BLOC1S6Q9UL45 172 aa1.49□□□□□ -2.17
SCFD1-219ENST00000556413 C14orf166Q9Y224 244 aaKnown RBP1.49□□□□□ -2.17
SCFD1-219ENST00000556413 LPAP08519 4548 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 TRAV30A0A087WSZ9 112 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SMIM9A6NGZ8 99 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 LYRM9A8MSI8 78 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 INS-IGF2F8WCM5 200 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 H3BQ15 152 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 CORTO00230 105 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 ISLRO14498 428 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RGS5O15539 181 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 PSCAO43653 123 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 GSTZ1O43708 216 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 ADAP1O75689 374 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 ATP6V1G2O95670 118 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 IFNA5P01569 189 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 LINC00869P0C866 280 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SULT1A3P0DMM9 295 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SULT1A4P0DMN0 295 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 PYYP10082 97 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SLC25A4P12235 298 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RNASE4P34096 147 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RPL5P46777 297 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 GALR1P47211 349 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 AP2S1P53680 142 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 TAS2R60P59551 318 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 DEFA3P59666 94 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 POLR2GP62487 172 aaKnown RBP eCLIP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SPCS2Q15005 226 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 GCSAMLQ5JQS6 135 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SPANXN5Q5MJ07 72 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 GPR107Q5VW38 600 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 PATE2Q6UY27 113 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 CYP2G1PQ6ZSU1 146 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SCXQ7RTU7 201 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 CLVS1Q8IUQ0 354 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 EXOC3-AS1Q8N2X6 119 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 BPIFCQ8NFQ6 507 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 LRRC20Q8TCA0 184 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RNASEH2CQ8TDP1 164 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 GLYATL2Q8WU03 294 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RAB2BQ8WUD1 216 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 TMEM263Q8WUH6 116 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 BLNKQ8WV28 456 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RBPMSQ93062 196 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 SHANK2-AS3Q9BTD1 123 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 ARL6Q9H0F7 186 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 RPP21Q9H633 154 aaKnown RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 C8orf4Q9NR00 106 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 FUT9Q9Y231 359 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 HIGD1AQ9Y241 93 aa1.48□□□□□ -2.17
SCFD1-219ENST00000556413 TIMM8BQ9Y5J9 83 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-219ENST00000556413 MUC2Q02817 5179 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 A0A0A6YYH2 397 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 SMIM31A0A1B0GVY4 71 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 A6NJ64 397 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 A8MTW9 85 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 SNRPGP15A8MWD9 76 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 DISC1C4P0D8 188 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 F6UZH7 168 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 GABARAPH6UMI1 98 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 MRPS12O15235 138 aaKnown RBP1.47□□□□□ -2.17
SCFD1-219ENST00000556413 GABARAPO95166 117 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 CDS2O95674 445 aa1.47□□□□□ -2.17
SCFD1-219ENST00000556413 IL5P05113 134 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms