RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 C16orf74Q96GX8 76 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 ZNF492Q9P255 531 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 PIEZO1Q92508 2521 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 IGLV3-19P01714 112 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 DEFB135Q30KP9 77 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 MRPL23Q16540 153 aaKnown RBP5.47□□□□□ -1.53
SYNE2-216ENST00000555002 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
SYNE2-216ENST00000555002 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
SYNE2-216ENST00000555002 PLXNA4Q9HCM2 1894 aa5.46□□□□□ -1.53
SYNE2-216ENST00000555002 HLA-DMBP28068 263 aa5.46□□□□□ -1.53
SYNE2-216ENST00000555002 DAND5Q8N907 189 aa5.46□□□□□ -1.53
SYNE2-216ENST00000555002 ZC2HC1AQ96GY0 325 aa5.46□□□□□ -1.53
SYNE2-216ENST00000555002 NDUFA1O15239 70 aa5.46□□□□□ -1.53
SYNE2-216ENST00000555002 PSMB8P28062 276 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 YPEL3P61236 119 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-216ENST00000555002 FOXI2Q6ZQN5 318 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 DEFB125Q8N687 156 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 MRPL35Q9NZE8 188 aaKnown RBP5.46□□□□□ -1.54
SYNE2-216ENST00000555002 HOXB4P17483 251 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-216ENST00000555002 ELANEP08246 267 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 K7EQD1 137 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 FGF16O43320 207 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 BTCP35070 178 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 LINC00114Q6XXX2 140 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 IGLV3-12A0A075B6K2 115 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 TMEM14EPQ6UXP3 125 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 KIAA1671Q9BY89 1806 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 EIF4EBP2Q13542 120 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-216ENST00000555002 VPREB3Q9UKI3 123 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
SYNE2-216ENST00000555002 ZFP2Q6ZN57 461 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 A0A1B0GW64 132 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 ATP6V0E2Q8NHE4 81 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 SIPA1L1O43166 1804 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 LY96Q9Y6Y9 160 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 SETD2Q9BYW2 2564 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-216ENST00000555002 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-216ENST00000555002 DUX4L9Q6RFH8 374 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-216ENST00000555002 VWCEQ96DN2 955 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 IGLV3-9A0A075B6K5 115 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 TPSG1Q9NRR2 321 aa5.45□□□□□ -1.54
SYNE2-216ENST00000555002 ZNF362Q5T0B9 420 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-216ENST00000555002 JMJD1CQ15652 2540 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 A0A096LNI7 61 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 A0A0J9YWU9 116 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 PRSS47A8MTI9 375 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 CYYR1Q96J86 154 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 SND1-IT1Q9HBX3 110 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 NPYP01303 97 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 TRBV12-3P01733 135 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 H3BMG7 143 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 MPLKIPQ8TAP9 179 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 IGLC2P0DOY2 106 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 IGLC3P0DOY3 106 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 DEFB112Q30KQ8 113 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 TMEM61Q8N0U2 210 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 C17orf77Q96MU5 243 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 LYPD6BQ8NI32 183 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 NTN5Q8WTR8 489 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-216ENST00000555002 KLF2Q9Y5W3 355 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-216ENST00000555002 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 K7ENP7 123 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 HERV-K104P63124 156 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 H3BRN7 92 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 CFPP27918 469 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 KLHDC3Q9BQ90 382 aa5.44□□□□□ -1.54
SYNE2-216ENST00000555002 TRBV24-1A0A075B6N3 115 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 F8W1H4 67 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 POU2AF1Q16633 256 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 C18orf32Q8TCD1 76 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
SYNE2-216ENST00000555002 ZNF493Q6ZR52 646 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 POLR3KQ9Y2Y1 108 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-216ENST00000555002 NDUFS7O75251 213 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 LYPD3O95274 346 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 HRCT1Q6UXD1 115 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 SH2D6Q7Z4S9 175 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 A0A087WZ39 114 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 A0A1W2PPM0 123 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 F8VRH5 84 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 NDUFS6O75380 124 aaKnown RBP5.43□□□□□ -1.54
SYNE2-216ENST00000555002 UBE2D1P51668 147 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 Q6ZWC4 215 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 C3orf22Q8N5N4 141 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 MLST8Q9BVC4 326 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 WDR90Q96KV7 1748 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 KIAA1549LQ6ZVL6 1849 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 ZNF833PQ6ZTB9 187 aa5.43□□□□□ -1.54
SYNE2-216ENST00000555002 RAI1Q7Z5J4 1906 aaPredicted RBP5.42□□□□□ -1.54
SYNE2-216ENST00000555002 K7EMI3 77 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 SMIM27A0A1W2PRY6 76 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 COLCA2A8K830 154 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 ATP5G1P05496 136 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 DKK2Q9UBU2 259 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 VOPP1Q96AW1 172 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 TANC1Q9C0D5 1861 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 RNF144BQ7Z419 303 aa5.42□□□□□ -1.54
SYNE2-216ENST00000555002 NDUFA4L2Q9NRX3 87 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms