RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 PRB4P10163 310 aaPredicted RBP1.21□□□□□ -2.22
LSM6P2-201ENST00000552208 IQCJQ1A5X6 159 aa1.21□□□□□ -2.22
LSM6P2-201ENST00000552208 UNQ5815/PRO19632Q6UWF5 114 aa1.21□□□□□ -2.22
LSM6P2-201ENST00000552208 DLG5Q8TDM6 1919 aa1.21□□□□□ -2.22
LSM6P2-201ENST00000552208 IBTKQ9P2D0 1353 aaPredicted RBP1.21□□□□□ -2.22
LSM6P2-201ENST00000552208 CDK12Q9NYV4 1490 aaPredicted RBP1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 EML5Q05BV3 1969 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 SLC25A6P12236 298 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 GUCA1AP43080 201 aaPredicted RBP1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 XAF1Q6GPH4 301 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 RPL13AP3Q6NVV1 102 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 DPH3Q96FX2 82 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 CCDC167Q9P0B6 97 aa1.2□□□□□ -2.22
LSM6P2-201ENST00000552208 VIRMAQ69YN4 1812 aaKnown RBP1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 PTPRDP23468 1912 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 HIGD1CA8MV81 97 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 TFF1P04155 84 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 FXYD3Q14802 87 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 Q6ZQY7 126 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 CCL19Q99731 98 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 CASZ1Q86V15 1759 aa1.19□□□□□ -2.22
LSM6P2-201ENST00000552208 BCL9LQ86UU0 1499 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 UNC79Q9P2D8 2635 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 TRAV12-2A0A075B6T6 113 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 NDUFA11Q86Y39 141 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 Q8N6K4 173 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 ROS1P08922 2347 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 MBD5Q9P267 1494 aa1.18□□□□□ -2.22
LSM6P2-201ENST00000552208 ASCC3Q8N3C0 2202 aaKnown RBP1.17□□□□□ -2.22
LSM6P2-201ENST00000552208 A0A1B0GV90 55 aa1.17□□□□□ -2.22
LSM6P2-201ENST00000552208 CCKP06307 115 aa1.17□□□□□ -2.22
LSM6P2-201ENST00000552208 SPCS2Q15005 226 aa1.17□□□□□ -2.22
LSM6P2-201ENST00000552208 C5orf56Q8N8D9 126 aa1.17□□□□□ -2.22
LSM6P2-201ENST00000552208 CNTRLQ7Z7A1 2325 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 PHLPP1O60346 1717 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 PIRTP0C851 137 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 OR2T2Q6IF00 324 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 KCNRGQ8N5I3 272 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 LINC00208Q96KT6 92 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 PSMG3Q9BT73 122 aaPredicted RBP1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 SNRNP25Q9BV90 132 aaKnown RBP1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 ROCK2O75116 1388 aaKnown RBP1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 ZGRF1Q86YA3 2104 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 TRPM7Q96QT4 1865 aa1.16□□□□□ -2.22
LSM6P2-201ENST00000552208 BLMP54132 1417 aaPredicted RBP1.15□□□□□ -2.22
LSM6P2-201ENST00000552208 TRBV30A0A0K0K1B3 111 aa1.15□□□□□ -2.23
LSM6P2-201ENST00000552208 DLEU1O43261 78 aa1.15□□□□□ -2.23
LSM6P2-201ENST00000552208 SPANXN1Q5VSR9 72 aa1.15□□□□□ -2.23
LSM6P2-201ENST00000552208 C10orf99Q6UWK7 81 aa1.15□□□□□ -2.23
LSM6P2-201ENST00000552208 LOC100130705A0A1B0GUX0 176 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 LINC00587B1AMM8 73 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 FAM25AB3EWG3 89 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 FAM25CB3EWG5 89 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 FAM25GB3EWG6 89 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 APODP05090 189 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 CAV3P56539 151 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 SLC48A1Q6P1K1 146 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 Q86TA4 180 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
LSM6P2-201ENST00000552208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 TEX49A0A1B0GTD5 131 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 FAM92AA1XBS5 289 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 K7EIL1 84 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 BTG2P78543 158 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 Q6ZS92 163 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 C2orf88Q9BSF0 95 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 PDCD10Q9BUL8 212 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 TMEM242Q9NWH2 141 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 PLXNA2O75051 1894 aa1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 SNRNP200O75643 2136 aaKnown RBP1.13□□□□□ -2.23
LSM6P2-201ENST00000552208 IL5P05113 134 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 NPC2P61916 151 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 MEIG1Q5JSS6 88 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 TSKUQ8WUA8 353 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 AGPAT4-IT1Q9H0P7 198 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 NINQ8N4C6 2090 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 SPAG17Q6Q759 2223 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 PEG3Q9GZU2 1588 aa1.12□□□□□ -2.23
LSM6P2-201ENST00000552208 HIST1H1DP16402 221 aaKnown RBP1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 C9orf116Q5BN46 136 aaPredicted RBP1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 SPTSSAQ969W0 71 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 SEC11CQ9BY50 192 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 KRTAP4-1Q9BYQ7 146 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 MED12Q93074 2177 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 CFTRP13569 1480 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 MYH13Q9UKX3 1938 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 FBN3Q75N90 2809 aa1.11□□□□□ -2.23
LSM6P2-201ENST00000552208 CITO14578 2027 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 DAPK1P53355 1430 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 SPAARA0A1B0GVQ0 90 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 A0A1W2PPM0 123 aa1.1□□□□□ -2.23
LSM6P2-201ENST00000552208 NDUFB6O95139 128 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms