RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 IGLV2-8P01709 118 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 NPSP0C0P6 89 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 CSN1S1P47710 185 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 RAB2AP61019 212 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 HBG1P69891 147 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 HBG2P69892 147 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 GAGE1Q13065 139 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 GAGE4Q13068 117 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 GAGE5Q13069 117 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 CFAP126Q5VTH2 177 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 Q6AWC8 147 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 IQCF2Q8IXL9 164 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 OR2T35Q8NGX2 323 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 DEDD2Q8WXF8 326 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 TXNDC17Q9BRA2 123 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 SAMD10Q9BYL1 202 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 NMES1Q9C002 83 aa4.51□□□□□ -1.69
PRPF40B-214ENST00000551320 M0R2P5 195 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 H2BFSP57053 126 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 DEFA3P59666 94 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 SLAQ13239 276 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 ATP6V1FQ16864 119 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 ZNF876PQ49A33 203 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 LINC01556Q5JQF7 62 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 SCXQ7RTU7 201 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 C14orf178Q8N769 122 aaPredicted RBP4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 TREM1Q9NP99 234 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 MBD2Q9UBB5 411 aa4.5□□□□□ -1.69
PRPF40B-214ENST00000551320 TRAV34A0A0B4J273 112 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 FAM240BA0A1B0GVZ2 78 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 ORM1P02763 201 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 NMBP08949 121 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 IFITM3Q01628 133 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 NTN5Q8WTR8 489 aaPredicted RBP4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 SPXQ9BT56 116 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 TMEM70Q9BUB7 260 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
PRPF40B-214ENST00000551320 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 RBAKDNA6NC62 111 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 RS1O15537 224 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 RNASE3P12724 160 aaKnown RBP4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 PRNTQ86SH4 94 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 ATP6V0E2Q8NHE4 81 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 CMTM2Q8TAZ6 248 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 PPP1R1CQ8WVI7 109 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 ATP5SQ99766 215 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
PRPF40B-214ENST00000551320 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 TRAV21A0A0B4J279 112 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 GRIFINA4D1Z8 144 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 RBFOX3A6NFN3 312 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 GCGP01275 180 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 ARL14EPLP0DKL9 152 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 TDRG1Q3Y452 100 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 LGALSLQ3ZCW2 172 aaPredicted RBP4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 LELP1Q5T871 98 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 Q6ZSA8 131 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 C10orf126Q8N4M7 172 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 GTSF1LQ9H1H1 148 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 OTORQ9NRC9 128 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 KLK12Q9UKR0 248 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 HSPB11Q9Y547 144 aa4.47□□□□□ -1.69
PRPF40B-214ENST00000551320 TMSB15BA0A087X1C1 80 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 IGKV3D-20A0A0C4DH25 116 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 MUC21A0A0G2JKD1 596 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 MUC21A0A140T8X8 626 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 PANO1I0J062 215 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 M0R036 132 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 MPC2O95563 127 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 IGLV2-11P01706 119 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 PFN1P07737 140 aaKnown RBP4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 RPL12P30050 165 aaKnown RBP4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 SSTP61278 116 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 KHDC3LQ587J8 217 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 HSD17B11Q8NBQ5 300 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 SCGB1C1Q8TD33 95 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 SH3BGRL3Q9H299 93 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 PSG8Q9UQ74 426 aa4.46□□□□□ -1.7
PRPF40B-214ENST00000551320 TRBV7-9A0A0J9YWB2 115 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 A0A1W2PPV4 95 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 C17orf112F2Z3M2 114 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 H3BVH4 76 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 TCRAP04437 139 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 UBE2G2P60604 165 aa4.45□□□□□ -1.7
PRPF40B-214ENST00000551320 ASAH1Q13510 395 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms