RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.2□□□□□ -2.44
GPN3-209ENST00000551079 SYNJ1O43426 1573 aa-0.2□□□□□ -2.44
GPN3-209ENST00000551079 ZNF142P52746 1687 aaPredicted RBP-0.21□□□□□ -2.44
GPN3-209ENST00000551079 OVOS2A0A0G2JMS6 1433 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 AKAP6Q13023 2319 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 PARP14Q460N5 1801 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 A0A087WTM6 91 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 TRBV10-1A0A0K0K1A3 114 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 A0A1B0GV72 72 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 PGRMC1O00264 195 aaKnown RBP-0.21□□□□□ -2.44
GPN3-209ENST00000551079 UQCRQO14949 82 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 PYYP10082 97 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 POLR2JP52435 117 aaKnown RBP-0.21□□□□□ -2.44
GPN3-209ENST00000551079 EMX2Q04743 252 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 UNQ5815/PRO19632Q6UWF5 114 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 DNAJC15Q9Y5T4 150 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 SOGA1O94964 1423 aa-0.21□□□□□ -2.44
GPN3-209ENST00000551079 C9JAW5 83 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 FAM107AO95990 144 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 SRP9P49458 86 aaKnown RBP-0.22□□□□□ -2.44
GPN3-209ENST00000551079 HSD17B12Q53GQ0 312 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 Q5BKY6 102 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 OR9Q1Q8NGQ5 310 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 METTL1Q9UBP6 276 aaKnown RBP-0.22□□□□□ -2.44
GPN3-209ENST00000551079 CHD9Q3L8U1 2897 aa-0.22□□□□□ -2.44
GPN3-209ENST00000551079 HMCN2Q8NDA2 5059 aa-0.22□□□□□ -2.45
GPN3-209ENST00000551079 C2CD3Q4AC94 2353 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 MYH9P35579 1960 aaKnown RBP-0.23□□□□□ -2.45
GPN3-209ENST00000551079 CACNA1AO00555 2505 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 FLNCQ14315 2725 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 LAMB1P07942 1786 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 OR2H2O95918 312 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 AKR1D1P51857 326 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 NPC2P61916 151 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 OR8B8Q15620 311 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 TMEM244Q5VVB8 128 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 OR2T2Q6IF00 324 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 SLC25A26Q70HW3 274 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 TMEM35BQ8NCS4 154 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 TMEM141Q96I45 108 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 DSCR8Q96T75 97 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 SLC35B3Q9H1N7 401 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 BANF2Q9H503 90 aa-0.23□□□□□ -2.45
GPN3-209ENST00000551079 DOPEY2Q9Y3R5 2298 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 NRXN2Q9P2S2 1712 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 ZNF292O60281 2723 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 GVQW2A0A096LPI5 108 aaPredicted RBP-0.24□□□□□ -2.45
GPN3-209ENST00000551079 J3KT08 172 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 SPINK1P00995 79 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 PAEPP09466 180 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 SLC25A6P12236 298 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 S100GP29377 79 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 S100A5P33763 92 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 TFAMQ00059 246 aaKnown RBP-0.24□□□□□ -2.45
GPN3-209ENST00000551079 TOMM20LQ6UXN7 152 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 TMEM91Q6ZNR0 172 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 SNX29P2Q8IUI4 249 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 IFI27L1Q96BM0 104 aa-0.24□□□□□ -2.45
GPN3-209ENST00000551079 TRAV36DV7A0A075B6V5 113 aa-0.25□□□□□ -2.45
GPN3-209ENST00000551079 M0R129 80 aa-0.25□□□□□ -2.45
GPN3-209ENST00000551079 PSPHP78330 225 aa-0.25□□□□□ -2.45
GPN3-209ENST00000551079 CLLU1Q5K131 121 aa-0.25□□□□□ -2.45
GPN3-209ENST00000551079 DDA1Q9BW61 102 aa-0.25□□□□□ -2.45
GPN3-209ENST00000551079 LSM2Q9Y333 95 aaKnown RBP-0.25□□□□□ -2.45
GPN3-209ENST00000551079 DSTQ03001 7570 aaKnown RBP-0.26□□□□□ -2.45
GPN3-209ENST00000551079 ZNF670-ZNF695F2Z2N8 137 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 PFDN1O60925 122 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 DPM2O94777 84 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 TNFSF15O95150 251 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 HIST1H1BP16401 226 aaKnown RBP-0.26□□□□□ -2.45
GPN3-209ENST00000551079 PLGLB1Q02325 96 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 OR8I2Q8N0Y5 310 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 Q96NJ1 140 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 PRR15LQ9BU68 103 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 CENPHQ9H3R5 247 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 HIGD1AQ9Y241 93 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 V9GYQ6 96 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 FAM208BQ5VWN6 2430 aa-0.26□□□□□ -2.45
GPN3-209ENST00000551079 UNC13BO14795 1591 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 ERCC6Q03468 1493 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 ARAP1Q96P48 1450 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 PKDREJQ9NTG1 2253 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 TEX49A0A1B0GTD5 131 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 H0YJX3 145 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 NMBP08949 121 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 NBEAP1P0C6P0 100 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 CALML5Q9NZT1 146 aa-0.27□□□□□ -2.45
GPN3-209ENST00000551079 SPTBN1Q01082 2364 aaKnown RBP-0.27□□□□□ -2.45
GPN3-209ENST00000551079 LAMC3Q9Y6N6 1575 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 CCDC171Q6TFL3 1326 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 PNMA8CA0A1B0GUJ8 204 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 HLA-DRB4P13762 266 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 GINS2Q9Y248 185 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 NOP16Q9Y3C1 178 aaKnown RBP-0.28□□□□□ -2.45
GPN3-209ENST00000551079 HLA-DRB4X5D2U9 266 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 CSMD3Q7Z407 3707 aa-0.28□□□□□ -2.45
GPN3-209ENST00000551079 SIPA1L3O60292 1781 aaPredicted RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 A0A1B0GX51 115 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 TCRBV3S1A0A5B6 114 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 F2Z2F3 143 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms