RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LGALS9BQ3B8N2 356 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 Q6AWC8 147 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 PRR27Q6MZM9 219 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 DPPA3Q6W0C5 159 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 STX12Q86Y82 276 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 TMEM256Q8N2U0 113 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 OR1L4Q8NGR5 311 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 OR2G3Q8NGZ4 309 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 BLNKQ8WV28 456 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 C16orf74Q96GX8 76 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 PFDN5Q99471 154 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 C20orf144Q9BQM9 153 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 NDUFAF3Q9BU61 184 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 MRPL32Q9BYC8 188 aaKnown RBP3.28□□□□□ -1.88
SCAF11-214ENST00000550893 Q9H3A6 140 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 NOP10Q9NPE3 64 aaKnown RBP3.28□□□□□ -1.88
SCAF11-214ENST00000550893 GSN-AS1Q9NRJ2 163 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
SCAF11-214ENST00000550893 SMLR1H3BR10 107 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 H7BYZ3 331 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 M0R2N4 97 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 HMGB3O15347 200 aaKnown RBP3.27□□□□□ -1.89
SCAF11-214ENST00000550893 NBEAP1P0C6P0 100 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 STAG3L2P0CL84 134 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 STAG3L3P0CL85 134 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 LINC00694P0DN24 101 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 DEFB130BP0DP73 79 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 DEFB130AP0DP74 79 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 HTN3P15516 51 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 ATP6V0CP27449 155 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 DAD1P61803 113 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 HBG1P69891 147 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 HBG2P69892 147 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 ZNF266Q14584 549 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 GUK1Q16774 197 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 ESRGQ1W209 222 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 RPL7L1Q6DKI1 246 aaKnown RBP3.27□□□□□ -1.89
SCAF11-214ENST00000550893 FAM210BQ96KR6 192 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 OR51M1Q9H341 326 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 Q9H8V8 135 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 BATF3Q9NR55 127 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 Q9UF83 564 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 TNFSF18Q9UNG2 199 aa3.27□□□□□ -1.89
SCAF11-214ENST00000550893 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TRBV7-9A0A0J9YWB2 115 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 LOC100131303A0A0U1RQF7 123 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 RBAKDNA6NC62 111 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 F6UZH7 168 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 NMBP08949 121 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 GIPP09681 153 aaPredicted RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 ARL14EPLP0DKL9 152 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 P0DMU3 169 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 PVALBP20472 110 aaPredicted RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 RHOBP62745 196 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 UBE2L3P68036 154 aaKnown RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TDRG1Q3Y452 100 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 RNF212Q495C1 297 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 ZNF493Q6ZR52 646 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 Q6ZRG5 221 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TMEM75Q8N9X5 138 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 LINC01587Q99440 93 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 UPK3BQ9BT76 320 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 MRPL16Q9NX20 251 aaKnown RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TIMM9Q9Y5J7 89 aa3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TIMM8BQ9Y5J9 83 aaPredicted RBP3.26□□□□□ -1.89
SCAF11-214ENST00000550893 TNXBP22105 4242 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 IGHV1OR15-1A0A075B7D0 117 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 IGHV3-16A0A0C4DH30 117 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 A0A0J9YY99 117 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 TEX48A0A1B0GUV7 120 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 SSNA1O43805 119 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 TYMSP04818 313 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 ATP5G1P05496 136 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 SFTA3P0C7M3 94 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 M6PRP20645 277 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 FUSP35637 526 aaKnown RBP eCLIP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 LEPP41159 167 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 ATP5G3P48201 142 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 FHITP49789 147 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 CRIP1P50238 77 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 ZNF138P52744 262 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 RANP62826 216 aaKnown RBP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 MUC21Q5SSG8 566 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 IBA57Q5T440 356 aaKnown RBP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 UFSP1Q6NVU6 142 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 EIF4E3Q8N5X7 224 aaKnown RBP3.25□□□□□ -1.89
SCAF11-214ENST00000550893 HSD17B11Q8NBQ5 300 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 OR10G4Q8NGN3 311 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 OR10J6PQ8NGY7 276 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 RXFP4Q8TDU9 374 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 LINC00477Q96M19 166 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
SCAF11-214ENST00000550893 PSMG3Q9BT73 122 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms