RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
NR4A1-215ENST00000550557 TRAV2A0A0B4J234 112 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 NUPR1O60356 82 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 P0C879 139 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 ANXA2RQ3ZCQ2 193 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 TRPT1Q86TN4 253 aaKnown RBP9.48□□□□□ -0.89
NR4A1-215ENST00000550557 TRAV8-4A0A0B4J246 113 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 ZNF561-AS1K7EIQ3 104 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 LINC00158P58513 81 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 A0A0U1RRA0 63 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 TMEM75Q8N9X5 138 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
NR4A1-215ENST00000550557 CHD7Q9P2D1 2997 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 ATP5G1P05496 136 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 PRR25Q96S07 402 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 SETD2Q9BYW2 2564 aaPredicted RBP9.47□□□□□ -0.89
NR4A1-215ENST00000550557 M0R2P5 195 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 Q6ZSV7 163 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
NR4A1-215ENST00000550557 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
NR4A1-215ENST00000550557 K7EIM0 57 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 FSTL3O95633 263 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 GAGE2BQ13066 116 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 GAGE2EQ4V326 116 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 SMR3AQ99954 134 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 GAGE2DQ9UEU5 116 aa9.46□□□□□ -0.89
NR4A1-215ENST00000550557 CTSGP08311 255 aa9.46□□□□□ -0.9
NR4A1-215ENST00000550557 PKD1L2Q7Z442 2459 aa9.46□□□□□ -0.9
NR4A1-215ENST00000550557 A0A087X0K7 114 aa9.46□□□□□ -0.9
NR4A1-215ENST00000550557 OVOL2Q9BRP0 275 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 FN1P02751 2386 aaKnown RBP9.45□□□□□ -0.9
NR4A1-215ENST00000550557 K7EMT4 169 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 HILS1P60008 231 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 MBD6Q96DN6 1003 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 RHOHQ15669 191 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 S100A7L2Q5SY68 101 aa9.45□□□□□ -0.9
NR4A1-215ENST00000550557 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 I3L2K1 104 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 BRWD1-AS2P59051 145 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 U3KQE9 123 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 ZFAND6Q6FIF0 208 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 TMEM61Q8N0U2 210 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.44□□□□□ -0.9
NR4A1-215ENST00000550557 RASL10AQ92737 203 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 JPT2Q9H910 190 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 NCKAP5O14513 1909 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 KMT2EQ8IZD2 1858 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 GAGE6Q13070 117 aa9.44□□□□□ -0.9
NR4A1-215ENST00000550557 PROP1O75360 226 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 IGHG4P01861 327 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
NR4A1-215ENST00000550557 IGLL1P15814 213 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 KIR3DS1Q14943 382 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
NR4A1-215ENST00000550557 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
NR4A1-215ENST00000550557 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 Q9HAA7 133 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 CHD3Q12873 2000 aaKnown RBP9.43□□□□□ -0.9
NR4A1-215ENST00000550557 HLA-DMBP28068 263 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 STPG4Q8N801 248 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 IGHV1-24A0A0C4DH33 117 aa9.43□□□□□ -0.9
NR4A1-215ENST00000550557 CRLF1O75462 422 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 IGKV1-17P01599 117 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 ESDP10768 282 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 TDRG1Q3Y452 100 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 C16orf74Q96GX8 76 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 MTORP42345 2549 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 IGHV3-38A0A0C4DH36 116 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 CRYGCP07315 174 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 MRPL23Q16540 153 aaKnown RBP9.42□□□□□ -0.9
NR4A1-215ENST00000550557 AMN1Q8IY45 258 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 IGKV1OR2-108A0A075B7D4 117 aa9.42□□□□□ -0.9
NR4A1-215ENST00000550557 F8W735 103 aaPredicted RBP9.42□□□□□ -0.9
NR4A1-215ENST00000550557 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
NR4A1-215ENST00000550557 RNF152Q8N8N0 203 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 AGPAT4-IT1Q9H0P7 198 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 C16orf54Q6UWD8 224 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 NEGR1Q7Z3B1 354 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 PRSS46E5RG02 174 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 DEFB4AO15263 64 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 DYNAPQ8N1N2 210 aa9.41□□□□□ -0.9
NR4A1-215ENST00000550557 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms