RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PEMTQ9UBM1 199 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 K7EMI3 77 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 ODF1Q14990 250 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 TMEM141Q96I45 108 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 SYNJ2BPP57105 145 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 HIGD1BQ9P298 99 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 CCDC168Q8NDH2 2452 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 TET2Q6N021 2002 aaPredicted RBP6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 MYO18BQ8IUG5 2567 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 USP9XQ93008 2570 aaPredicted RBP6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 TRBV20-1A0A075B6N2 111 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 SPINK13Q1W4C9 94 aa6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 TRPT1Q86TN4 253 aaKnown RBP6.35□□□□□ -1.39
PRKAB1-207ENST00000542698 TEX48A0A1B0GUV7 120 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 MSMBP08118 114 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 YAE1D1Q9NRH1 226 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 GAGE12HA6NDE8 117 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 DNAL4O96015 105 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 LY6G5BQ8NDX9 201 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 SONP18583 2426 aaKnown RBP6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 IGLL5B9A064 214 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 C9JAW5 83 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 M0R2P5 195 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 ZFP36P26651 326 aaKnown RBP6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 TMEM101Q96IK0 257 aa6.34□□□□□ -1.39
PRKAB1-207ENST00000542698 TLN2Q9Y4G6 2542 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 IGHV7-4-1A0A0J9YVY3 117 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 CKS1BP61024 79 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 Q5PR19 223 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.4
PRKAB1-207ENST00000542698 TRAV12-2A0A075B6T6 113 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 IGLC6P0CF74 106 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 C9orf47Q6ZRZ4 202 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 NAV2Q8IVL1 2488 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 FBXL19-AS1Q494R0 122 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 IGHV1OR15-1A0A075B7D0 117 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 DSCR9P59020 149 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 C16orf54Q6UWD8 224 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 SH2D6Q7Z4S9 175 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 STHQ8IWL8 128 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 KLK9Q9UKQ9 250 aa6.33□□□□□ -1.4
PRKAB1-207ENST00000542698 TRGV2A0A075B6R0 118 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 LY6LH3BQJ8 138 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 J3QQQ9 107 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 DEFB131AP59861 70 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 NPC2P61916 151 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 AZU1P20160 251 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 SRSF2Q01130 221 aaKnown RBP6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 WFDC2Q14508 124 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 OR13C6PQ8NH95 151 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 I3L3M4 83 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 ZFAND6Q6FIF0 208 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 ADAMTS20P59510 1910 aa6.32□□□□□ -1.4
PRKAB1-207ENST00000542698 FSTL3O95633 263 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 KLHL30-AS1Q8NEE0 82 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 H3BUA1 57 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 C2orf82Q6UX34 121 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 C5orf56Q8N8D9 126 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 HIVEP3Q5T1R4 2406 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 SETD2Q9BYW2 2564 aaPredicted RBP6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 ODF3BA8MYP8 253 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 RBX1P62877 108 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 BLCAPP62952 87 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 ADORA2A-AS1P86434 159 aa6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 PHLDA1Q8WV24 401 aaPredicted RBP6.31□□□□□ -1.4
PRKAB1-207ENST00000542698 A0A1W2PRX2 142 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 C11orf44Q8N8P7 122 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 GATA3P23771 443 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 SIRPDQ9H106 197 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 BAHCC1Q9P281 2608 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 TNFRSF13BO14836 293 aaPredicted RBP6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 TSPAN13O95857 204 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 FGF6P10767 208 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 DEFB1P60022 68 aa6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
PRKAB1-207ENST00000542698 TRBV7-9A0A0J9YWB2 115 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 LINC01548A6NM66 108 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 G3V4G9 280 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
PRKAB1-207ENST00000542698 AJUBAQ96IF1 538 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms