RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 OR8I2Q8N0Y5 310 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 OR2G3Q8NGZ4 309 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
CPSF7-220ENST00000541963 GPR82Q96P67 336 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 TMEM147Q9BVK8 224 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 EDA2RQ9HAV5 297 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 WFDC1Q9HC57 220 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 NRN1Q9NPD7 142 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MDFICQ9P1T7 246 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
CPSF7-220ENST00000541963 TGP01266 2768 aa3.9□□□□□ -1.78
CPSF7-220ENST00000541963 IGKV1D-37A0A075B6S9 117 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 TGIF2-C20orf24A0A0A6YYL0 155 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 HYPMO75409 117 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 CXCL1P09341 107 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF688P0C7X2 276 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 ORM2P19652 201 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 GALR1P47211 349 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 RBX1P62877 108 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 HBG1P69891 147 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 HBG2P69892 147 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 RIGQ13278 110 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 OR5I1Q13606 314 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 MUC21Q5SSG8 566 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 CASC10Q5T4H9 136 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 SPATA31B1PQ5VZV4 182 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF705AQ6ZN79 300 aaPredicted RBP3.9□□□□□ -1.79
CPSF7-220ENST00000541963 LINC01551Q86U37 167 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 MTURNQ8N3F0 131 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 CYB561D1Q8N8Q1 229 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 Q8NBF4 154 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 OR1B1Q8NGR6 318 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 DCANP1Q8TF63 244 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 ATP5SQ99766 215 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 CHCHD5Q9BSY4 110 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 PARLQ9H300 379 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 RETNQ9HD89 108 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF586Q9NXT0 402 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 RCL1Q9Y2P8 373 aaKnown RBP3.9□□□□□ -1.79
CPSF7-220ENST00000541963 LSM5Q9Y4Y9 91 aaKnown RBP3.9□□□□□ -1.79
CPSF7-220ENST00000541963 TIMM9Q9Y5J7 89 aa3.9□□□□□ -1.79
CPSF7-220ENST00000541963 IGKV1OR2-108A0A075B7D4 117 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 A0A0J9YWU9 116 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF727A8MUV8 499 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 CA1P00915 261 aaPredicted RBP3.89□□□□□ -1.79
CPSF7-220ENST00000541963 PFN1P07737 140 aaKnown RBP3.89□□□□□ -1.79
CPSF7-220ENST00000541963 OR5G3P0C626 314 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 RPL7P18124 248 aaKnown RBP3.89□□□□□ -1.79
CPSF7-220ENST00000541963 RPL29P47914 159 aaKnown RBP3.89□□□□□ -1.79
CPSF7-220ENST00000541963 PSMB3P49720 205 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 PLP1P60201 277 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 EWSR1Q01844 656 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPSF7-220ENST00000541963 DEFB135Q30KP9 77 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 PSMG4Q5JS54 123 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 ZFAND6Q6FIF0 208 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 EBLN2Q6P2I7 272 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 OR11H2Q8NH07 326 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 C11orf45Q8TAV5 145 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 SCGB1C1Q8TD33 95 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 RARRES2Q99969 163 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 SLC25A22Q9H936 323 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 HIGD1AQ9Y241 93 aa3.89□□□□□ -1.79
CPSF7-220ENST00000541963 FAM24AA6NFZ4 105 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 KNCNA6PVL3 124 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF705FA8MVS1 300 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 C17orf112F2Z3M2 114 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 ISLRO14498 428 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 SOCS3O14543 225 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 PDE6DO43924 150 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 SNRPCP09234 159 aaKnown RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 LINC00869P0C866 280 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF705DP0CH99 300 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 ZNF705BP0CI00 300 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 GATA2P23769 480 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 ATP6V0CP27449 155 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 MEF2BQ02080 365 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 PSG3Q16557 428 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 FOXI2Q6ZQN5 318 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 OR4C5Q8NGB2 326 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 OR1L4Q8NGR5 311 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 CMTM2Q8TAZ6 248 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 TMEM37Q8WXS4 190 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 SMIM7Q9BQ49 75 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 RSG1Q9BU20 258 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 SLC25A39Q9BZJ4 359 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-220ENST00000541963 RPRMQ9NS64 109 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 URGCP-MRPS24S4R325 110 aa3.88□□□□□ -1.79
CPSF7-220ENST00000541963 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 NUPR2A6NF83 97 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 H0Y8G0 127 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 H3BMM0 161 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 COX7A2P2O60397 106 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 MPDU1O75352 247 aa3.87□□□□□ -1.79
CPSF7-220ENST00000541963 CST7O76096 145 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms