RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 BMI1P35226 326 aa11.6□□□□□ -0.55
CLPTM1-202ENST00000541297 A0A1W2PPM0 123 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 TMEM89A2RUT3 159 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 ELANEP08246 267 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 SRD5A1P18405 259 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 CKS2P33552 79 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 U3KQE9 123 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 HIVEP1P15822 2718 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 RNF182Q8N6D2 247 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 TMEM190Q8WZ59 177 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 C18orf15Q96N68 181 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 TWIST1Q15672 202 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
CLPTM1-202ENST00000541297 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-202ENST00000541297 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
CLPTM1-202ENST00000541297 KHDC1LQ5JSQ8 128 aa11.58□□□□□ -0.56
CLPTM1-202ENST00000541297 DEFB136Q30KP8 78 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 IGKV3-7A0A075B6H7 116 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 IGHV4OR15-8A0A075B7B6 117 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 A0A087WW49 117 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 LGALS1P09382 135 aaKnown RBP11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 MYOZ3Q8TDC0 251 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 UBE2E2Q96LR5 201 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 TTTY13Q9BZ97 58 aa11.57□□□□□ -0.56
CLPTM1-202ENST00000541297 RPL11P62913 178 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 IGKV2D-26A0A0A0MRZ7 120 aa11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 TCTEX1D4Q5JR98 221 aa11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 OR5A1Q8NGJ0 315 aa11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 MSRB1Q9NZV6 116 aa11.56□□□□□ -0.56
CLPTM1-202ENST00000541297 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 FABP2P12104 132 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 C8orf86Q6ZUL3 223 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 RNF152Q8N8N0 203 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 Q8TAT8 98 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 NSD1Q96L73 2696 aaPredicted RBP11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 GCSHP23434 173 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
CLPTM1-202ENST00000541297 IGHV7-4-1A0A0J9YVY3 117 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 FXYD2P54710 66 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 SYNJ2BPP57105 145 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 SCGB2A2Q13296 93 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 GPHB5Q86YW7 130 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 PRR25Q96S07 402 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 DUX3Q96PT4 197 aa11.54□□□□□ -0.56
CLPTM1-202ENST00000541297 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 LEPP41159 167 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 RNASE1P07998 156 aaKnown RBP11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 C16orf92Q96LL3 132 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 VGLL1Q99990 258 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 SLC50A1Q9BRV3 221 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
CLPTM1-202ENST00000541297 K7ERJ3 54 aa11.52□□□□□ -0.56
CLPTM1-202ENST00000541297 RNF185Q96GF1 192 aa11.52□□□□□ -0.56
CLPTM1-202ENST00000541297 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
CLPTM1-202ENST00000541297 ODF1Q14990 250 aa11.52□□□□□ -0.57
CLPTM1-202ENST00000541297 MAP1LC3AQ9H492 121 aa11.52□□□□□ -0.57
CLPTM1-202ENST00000541297 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
CLPTM1-202ENST00000541297 PRSS1P07477 247 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 EVI2AP22794 236 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 HILS1P60008 231 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 RPL24P83731 157 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 ERCC8Q13216 396 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 SLURP1P55000 103 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 ZMAT4Q9H898 229 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 WNK1Q9H4A3 2382 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 ORM1P02763 201 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 CHAC1Q9BUX1 264 aa11.51□□□□□ -0.57
CLPTM1-202ENST00000541297 TEX48A0A1B0GUV7 120 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 K7EMI3 77 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 K7EMT4 169 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 GATA1P15976 413 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 FCER1GP30273 86 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 LINC01006Q8NI28 216 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
CLPTM1-202ENST00000541297 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
CLPTM1-202ENST00000541297 IGKCP01834 107 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms