RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-204	ENST00000540504	RNASE3	P12724	160 aa	Known RBP	11.24	□□□□□ -0.61
PSMD3-204	ENST00000540504	OR10J3	Q5JRS4	329 aa		11.24	□□□□□ -0.61
PSMD3-204	ENST00000540504	ZNF506	Q5JVG8	444 aa		11.24	□□□□□ -0.61
PSMD3-204	ENST00000540504	PIK3CD-AS1	Q5SR53	167 aa		11.24	□□□□□ -0.61
PSMD3-204	ENST00000540504	LELP1	Q5T871	98 aa		11.24	□□□□□ -0.61
PSMD3-204	ENST00000540504	GCSH	P23434	173 aa		11.23	□□□□□ -0.61
PSMD3-204	ENST00000540504	KRTAP10-1	P60331	282 aa		11.23	□□□□□ -0.61
PSMD3-204	ENST00000540504	NTN5	Q8WTR8	489 aa	Predicted RBP	11.23	□□□□□ -0.61
PSMD3-204	ENST00000540504	GTSF1L	Q9H1H1	148 aa		11.23	□□□□□ -0.61
PSMD3-204	ENST00000540504	IGHV3-73	A0A0B4J1V6	119 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	LRCOL1	A6NCL2	159 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	FABP5P3	A8MUU1	101 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504		A8MWV9	139 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504		Q5BKY6	102 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	ZFP2	Q6ZN57	461 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	ATP6V0E2	Q8NHE4	81 aa		11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	NKX6-2	Q9C056	277 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMD3-204	ENST00000540504	CTXND1	A0A1B0GTU2	59 aa		11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	IFNA7	P01567	189 aa		11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	S100A4	P26447	101 aa	Known RBP	11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	LAGE3	Q14657	143 aa		11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	RPL7L1	Q6DKI1	246 aa	Known RBP	11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	FRZB	Q92765	325 aa		11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	ARL2-SNX15	V9GYD0	113 aa		11.21	□□□□□ -0.61
PSMD3-204	ENST00000540504	IGKV3D-20	A0A0C4DH25	116 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	RNF222	A6NCQ9	220 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	ZNF726P1	Q15940	193 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	HIST1H2BA	Q96A08	127 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	PARL	Q9H300	379 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	IL36B	Q9NZH7	164 aa		11.2	□□□□□ -0.62
PSMD3-204	ENST00000540504	FXYD6-FXYD2	A0A087WZ82	144 aa		11.19	□□□□□ -0.62
PSMD3-204	ENST00000540504	TRAV34	A0A0B4J273	112 aa		11.19	□□□□□ -0.62
PSMD3-204	ENST00000540504	ASIP	P42127	132 aa		11.19	□□□□□ -0.62
PSMD3-204	ENST00000540504	LINC00479	Q96M42	142 aa		11.19	□□□□□ -0.62
PSMD3-204	ENST00000540504	IGLV5-52	A0A0A0MRZ9	124 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	PEX7	O00628	323 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	IGHV3-30	P01768	117 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	IGHV3-33	P01772	117 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	IGHV3-30-3	P0DP02	117 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	IGHV3-30-5	P0DP03	117 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	DNLZ	Q5SXM8	178 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	TMEM70	Q9BUB7	260 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	TM2D2	Q9BX73	214 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504		Q9HAA7	133 aa		11.18	□□□□□ -0.62
PSMD3-204	ENST00000540504	FAM74A7	A6NL05	159 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	INAFM2	P0DMQ5	153 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	UBE2G2	P60604	165 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	AKR1C8P	Q5T2L2	129 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504		Q5VSD8	79 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	COX8C	Q7Z4L0	72 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504		Q86TA4	180 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504		Q8N814	137 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	OR2T35	Q8NGX2	323 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504	ZFP30	Q9Y2G7	519 aa		11.17	□□□□□ -0.62
PSMD3-204	ENST00000540504		A0A087WWC5	75 aa		11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504		B4DEV8	164 aa		11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504	LINC00694	P0DN24	101 aa		11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504	FGF8	P55075	233 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504		Q6ZSN1	163 aa		11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504	SYT8	Q8NBV8	401 aa		11.16	□□□□□ -0.62
PSMD3-204	ENST00000540504	TRAV8-3	A0A0A6YYJ7	113 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	GAGE12J	A6NER3	117 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	RHOD	O00212	210 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	GAGE1	Q13065	139 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	GAGE4	Q13068	117 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	GAGE5	Q13069	117 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	GAGE13	Q4V321	117 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	UFSP1	Q6NVU6	142 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	FMC1	Q96HJ9	113 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	TCEAL7	Q9BRU2	100 aa		11.15	□□□□□ -0.62
PSMD3-204	ENST00000540504	KRBOX1	C9JBD0	128 aa		11.14	□□□□□ -0.63
PSMD3-204	ENST00000540504	TOR2A	Q5JU69	321 aa		11.14	□□□□□ -0.63
PSMD3-204	ENST00000540504	ZC2HC1A	Q96GY0	325 aa		11.14	□□□□□ -0.63
PSMD3-204	ENST00000540504	TRBV6-1	A0A0K0K1D8	114 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	MAP1LC3B2	A6NCE7	125 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	FAM229A	H3BQW9	127 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504		H3BVH4	76 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	C1QB	P02746	253 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	ARMS2	P0C7Q2	107 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	FHIT	P49789	147 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	CRIP1	P50238	77 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	UBE2G1	P62253	170 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	FAM162B	Q5T6X4	162 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	DMRTA1	Q5VZB9	504 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	OR11H4	Q8NGC9	324 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	STOML3	Q8TAV4	291 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	MAP1LC3B	Q9GZQ8	125 aa		11.13	□□□□□ -0.63
PSMD3-204	ENST00000540504	SH2D1A	O60880	128 aa		11.12	□□□□□ -0.63
PSMD3-204	ENST00000540504	SAMD10	Q9BYL1	202 aa		11.12	□□□□□ -0.63
PSMD3-204	ENST00000540504	JPT2	Q9H910	190 aa		11.12	□□□□□ -0.63
PSMD3-204	ENST00000540504	FAT1	Q14517	4588 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504		M0R036	132 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	SEC11B	P0C7V7	166 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	ZNF674	Q2M3X9	581 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	C14orf178	Q8N769	122 aa	Predicted RBP	11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	SFRP2	Q96HF1	295 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	PHLDA3	Q9Y5J5	127 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504	COX11	Q9Y6N1	276 aa		11.11	□□□□□ -0.63
PSMD3-204	ENST00000540504		G3V3Q6	166 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms