RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GAGE1Q13065 139 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 GAGE4Q13068 117 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 GAGE5Q13069 117 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 ZFP2Q6ZN57 461 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 SCGB1C1Q8TD33 95 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
LPCAT3-210ENST00000540090 A0A087WWC5 75 aa13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 CYCSP99999 105 aaKnown RBP13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 ACOT6Q3I5F7 207 aaPredicted RBP13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 RMI2Q96E14 147 aa13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 CCDC32Q9BV29 185 aa13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 PARLQ9H300 379 aa13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
LPCAT3-210ENST00000540090 SERTM2A0A1B0GWG4 89 aa13.03□□□□□ -0.32
LPCAT3-210ENST00000540090 GCGP01275 180 aa13.03□□□□□ -0.32
LPCAT3-210ENST00000540090 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
LPCAT3-210ENST00000540090 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
LPCAT3-210ENST00000540090 Q9UF83 564 aa13.03□□□□□ -0.32
LPCAT3-210ENST00000540090 A0A1W2PPV4 95 aa13.02□□□□□ -0.33
LPCAT3-210ENST00000540090 IGLV2-8P01709 118 aa13.02□□□□□ -0.33
LPCAT3-210ENST00000540090 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
LPCAT3-210ENST00000540090 IGKV2D-24A0A075B6R9 120 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 A8MWV9 139 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 MZT2BQ6NZ67 158 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 OR2T35Q8NGX2 323 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 PPP1R1CQ8WVI7 109 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 LINC00479Q96M42 142 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 PSG8Q9UQ74 426 aa13.01□□□□□ -0.33
LPCAT3-210ENST00000540090 TCRAP04437 139 aa13□□□□□ -0.33
LPCAT3-210ENST00000540090 SEC11BP0C7V7 166 aa13□□□□□ -0.33
LPCAT3-210ENST00000540090 FGF8P55075 233 aaPredicted RBP13□□□□□ -0.33
LPCAT3-210ENST00000540090 NIT1Q86X76 327 aa13□□□□□ -0.33
LPCAT3-210ENST00000540090 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
LPCAT3-210ENST00000540090 IGLV2-11P01706 119 aa12.99□□□□□ -0.33
LPCAT3-210ENST00000540090 SMUG1Q53HV7 270 aa12.99□□□□□ -0.33
LPCAT3-210ENST00000540090 UFSP1Q6NVU6 142 aa12.99□□□□□ -0.33
LPCAT3-210ENST00000540090 C5orf17Q8NAS9 161 aa12.99□□□□□ -0.33
LPCAT3-210ENST00000540090 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
LPCAT3-210ENST00000540090 K7EQM0 130 aa12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 H2BFSP57053 126 aa12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 RAB2AP61019 212 aa12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 LGALSLQ3ZCW2 172 aaPredicted RBP12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
LPCAT3-210ENST00000540090 IGKV3D-20A0A0C4DH25 116 aa12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 MPC2O95563 127 aa12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 RPL12P30050 165 aaKnown RBP12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 FLI1Q01543 452 aaPredicted RBP12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 ATRAIDQ6UW56 229 aa12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 JPT2Q9H910 190 aa12.97□□□□□ -0.33
LPCAT3-210ENST00000540090 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 ZFP69Q49AA0 526 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 PRNTQ86SH4 94 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 SUN5Q8TC36 379 aa12.96□□□□□ -0.33
LPCAT3-210ENST00000540090 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
LPCAT3-210ENST00000540090 SAPCD1Q5SSQ6 148 aa12.95□□□□□ -0.34
LPCAT3-210ENST00000540090 CHCHD7Q9BUK0 85 aa12.95□□□□□ -0.34
LPCAT3-210ENST00000540090 EPDR1Q9UM22 224 aa12.95□□□□□ -0.34
LPCAT3-210ENST00000540090 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 PET100P0DJ07 73 aa12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 ELOBQ15370 118 aa12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 DAZAP1Q96EP5 407 aaKnown RBP12.94□□□□□ -0.34
LPCAT3-210ENST00000540090 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 SUMO1P63165 101 aaKnown RBP12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 ENKURQ8TC29 256 aa12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
LPCAT3-210ENST00000540090 A0A087WX48 190 aa12.92□□□□□ -0.34
LPCAT3-210ENST00000540090 GCHFRP30047 84 aa12.92□□□□□ -0.34
LPCAT3-210ENST00000540090 ASIPP42127 132 aa12.92□□□□□ -0.34
LPCAT3-210ENST00000540090 CDC34P49427 236 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-210ENST00000540090 Q0VG73 95 aa12.92□□□□□ -0.34
LPCAT3-210ENST00000540090 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
LPCAT3-210ENST00000540090 RHODO00212 210 aa12.91□□□□□ -0.34
LPCAT3-210ENST00000540090 INMT-MINDY4F8WBC2 141 aa12.9□□□□□ -0.34
LPCAT3-210ENST00000540090 KCNIP4Q6PIL6 250 aa12.9□□□□□ -0.34
LPCAT3-210ENST00000540090 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
LPCAT3-210ENST00000540090 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
LPCAT3-210ENST00000540090 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
LPCAT3-210ENST00000540090 DNLZQ5SXM8 178 aa12.88□□□□□ -0.35
LPCAT3-210ENST00000540090 ENHOQ6UWT2 76 aa12.88□□□□□ -0.35
LPCAT3-210ENST00000540090 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
LPCAT3-210ENST00000540090 TMEM167BQ9NRX6 74 aa12.88□□□□□ -0.35
LPCAT3-210ENST00000540090 TRAV34A0A0B4J273 112 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 H3BVH4 76 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 MT1HL1P0DM35 61 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 FAM74A4Q5TZK3 123 aa12.87□□□□□ -0.35
LPCAT3-210ENST00000540090 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms