RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MED14OSP0DP75 135 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 Q8N9W7 124 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 TIMD4Q96H15 378 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 U3KQE9 123 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 MT-ATP8P03928 68 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 HERVK_113P61574 105 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 ZFP2Q6ZN57 461 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 NDUFA11Q86Y39 141 aa13.4□□□□□ -0.26
RAB40C-205ENST00000539661 ARHGAP32A7KAX9 2087 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV1-69DA0A0B4J2H0 117 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV3-66A0A0C4DH42 116 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 RNF223E7ERA6 249 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 FHL3Q13643 280 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 Q5PR19 223 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
RAB40C-205ENST00000539661 XGP55808 180 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 Q6ZQT7 251 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
RAB40C-205ENST00000539661 LINC00477Q96M19 166 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
RAB40C-205ENST00000539661 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
RAB40C-205ENST00000539661 TRAV21A0A0B4J279 112 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 A0A0J9YY99 117 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
RAB40C-205ENST00000539661 PRR9Q5T870 116 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 TRBV7-1A0A0A6YYK4 115 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 A8MWV9 139 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 ASIPP42127 132 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 CLEC19AQ6UXS0 136 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 GLMPQ8WWB7 406 aa13.37□□□□□ -0.27
RAB40C-205ENST00000539661 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 GRNP28799 593 aaKnown RBP13.36□□□□□ -0.27
RAB40C-205ENST00000539661 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 ERG28Q9UKR5 140 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 TCL1BO95988 128 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 ECSCRQ19T08 205 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 ITLN2Q8WWU7 325 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-205ENST00000539661 PHLDA3Q9Y5J5 127 aa13.36□□□□□ -0.27
RAB40C-205ENST00000539661 M0QXV9 152 aa13.35□□□□□ -0.27
RAB40C-205ENST00000539661 CRYGDP07320 174 aa13.35□□□□□ -0.27
RAB40C-205ENST00000539661 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
RAB40C-205ENST00000539661 C14orf178Q8N769 122 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV3OR16-13A0A075B7E8 117 aa13.35□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV3-74A0A0B4J1X5 117 aa13.35□□□□□ -0.27
RAB40C-205ENST00000539661 IGLV4-69A0A075B6H9 119 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 C10orf126Q8N4M7 172 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 ZFAND2AQ8N6M9 145 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 KLHL30-AS1Q8NEE0 82 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 PTH2Q96A98 100 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 HIVEP3Q5T1R4 2406 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 C11orf86A6NJI1 115 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV3-30P01768 117 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 IGHV3-30-5P0DP03 117 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 CDSNQ15517 529 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 WFDC12Q8WWY7 111 aa13.34□□□□□ -0.27
RAB40C-205ENST00000539661 MGPP08493 103 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 GPHB5Q86YW7 130 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 OVOL1O14753 267 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 CFC1P0CG37 223 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 PMVKQ15126 192 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 TMEM141Q96I45 108 aa13.33□□□□□ -0.28
RAB40C-205ENST00000539661 DUSP14O95147 198 aaKnown RBP13.32□□□□□ -0.28
RAB40C-205ENST00000539661 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
RAB40C-205ENST00000539661 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
RAB40C-205ENST00000539661 OR10J6PQ8NGY7 276 aa13.32□□□□□ -0.28
RAB40C-205ENST00000539661 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
RAB40C-205ENST00000539661 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 A0A087WW49 117 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 IGIPA6NJ69 53 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 LINC01560Q8TB33 94 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 PRO1854Q9UHT4 67 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 TSHBP01222 138 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 CFAP46Q8IYW2 2715 aa13.31□□□□□ -0.28
RAB40C-205ENST00000539661 NXPH4O95158 308 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 ANKRD29Q8N6D5 301 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 C20orf173Q96LM9 149 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 CACNA1BQ00975 2339 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 ANXA2RQ3ZCQ2 193 aa13.3□□□□□ -0.28
RAB40C-205ENST00000539661 IGF1P05019 195 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 APRG1Q8IVJ8 170 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 TRBV7-9A0A0J9YWB2 115 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 LY6HO94772 140 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 FAM19A4Q96LR4 140 aa13.29□□□□□ -0.28
RAB40C-205ENST00000539661 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
RAB40C-205ENST00000539661 RNF183Q96D59 192 aa13.28□□□□□ -0.28
RAB40C-205ENST00000539661 PIEZO1Q92508 2521 aa13.28□□□□□ -0.28
RAB40C-205ENST00000539661 FLNCQ14315 2725 aa13.28□□□□□ -0.28
RAB40C-205ENST00000539661 LINC01548A6NM66 108 aa13.27□□□□□ -0.28
RAB40C-205ENST00000539661 POLR2KP53803 58 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms