RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 OCIAD2Q56VL3 154 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 OR2T2Q6IF00 324 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 PLPP5Q8NEB5 264 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 PPDPFLQ8WWR9 84 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 SNRNP25Q9BV90 132 aaKnown RBP1.22□□□□□ -2.21
SNHG1-210ENST00000539303 AGPAT4-IT1Q9H0P7 198 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 FBN1P35555 2871 aaKnown RBP1.22□□□□□ -2.21
SNHG1-210ENST00000539303 ADGRB1O14514 1584 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 MBD5Q9P267 1494 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 CCDC179H3BU77 68 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 J3QKU1 62 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 IGLV3-1P01715 115 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 PIRTP0C851 137 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 SLC25A6P12236 298 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 SPATA45Q537H7 98 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 SPANXN1Q5VSR9 72 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 PP6455Q8WZ26 134 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
SNHG1-210ENST00000539303 ATG5Q9H1Y0 275 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 RERGLQ9H628 205 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 NAA60Q9H7X0 242 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 NDUFA12Q9UI09 145 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 SDK1Q7Z5N4 2213 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 EIF4G3O43432 1585 aaKnown RBP1.21□□□□□ -2.22
SNHG1-210ENST00000539303 AKAP11Q9UKA4 1901 aa1.21□□□□□ -2.22
SNHG1-210ENST00000539303 PLXNA2O75051 1894 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 SORL1Q92673 2214 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 COL4A1P02462 1669 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 SPAARA0A1B0GVQ0 90 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-210ENST00000539303 NUPR2A6NF83 97 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 ATP6V1G2-DDX39BF2Z307 99 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 CORTO00230 105 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 NDUFB6O95139 128 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 IGHV3-30P01768 117 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 IGHV3-30-5P0DP03 117 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 PIPP12273 146 aaPredicted RBP1.2□□□□□ -2.22
SNHG1-210ENST00000539303 PDE6GP18545 87 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 RPL7L1Q6DKI1 246 aaKnown RBP1.2□□□□□ -2.22
SNHG1-210ENST00000539303 LINC00526Q96FQ7 95 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 ATG2AQ2TAZ0 1938 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 ADGRB2O60241 1585 aa1.2□□□□□ -2.22
SNHG1-210ENST00000539303 TRBV10-1A0A0K0K1A3 114 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 A6NIN4 97 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 RPL37AP61513 92 aaKnown RBP1.19□□□□□ -2.22
SNHG1-210ENST00000539303 BTG2P78543 158 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 DEFB119Q8N690 84 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 TMEM141Q96I45 108 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 C12orf57Q99622 126 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 SERP1Q9Y6X1 66 aa1.19□□□□□ -2.22
SNHG1-210ENST00000539303 RIMS1Q86UR5 1692 aaKnown RBP1.19□□□□□ -2.22
SNHG1-210ENST00000539303 CFTRP13569 1480 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 ZGRF1Q86YA3 2104 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 CXorf51AA0A1B0GTR3 108 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 MCRIP1C9JLW8 97 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 CCKP06307 115 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 GNG4P50150 75 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 TPPP2P59282 170 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 FXYD4P59646 89 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 UBE2G1P62253 170 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 Q56UQ5 140 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 S100A7L2Q5SY68 101 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 C10orf105Q8TEF2 133 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 ODF3Q96PU9 254 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 TCEAL7Q9BRU2 100 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 FAM135AQ9P2D6 1515 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 CITO14578 2027 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 BCL9LQ86UU0 1499 aa1.18□□□□□ -2.22
SNHG1-210ENST00000539303 CTTNBP2Q8WZ74 1663 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 TCRBV3S1A0A5B6 114 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 C20orf202A1L168 122 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 HIGD1CA8MV81 97 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 APOC4-APOC2K7ER74 178 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 APOC2P02655 101 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 PPP3R1P63098 170 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 SLC48A1Q6P1K1 146 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 SBSPONQ8IVN8 264 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 LSM10Q969L4 123 aaKnown RBP1.17□□□□□ -2.22
SNHG1-210ENST00000539303 MRPL35Q9NZE8 188 aaKnown RBP1.17□□□□□ -2.22
SNHG1-210ENST00000539303 C22orf24Q9Y442 160 aa1.17□□□□□ -2.22
SNHG1-210ENST00000539303 PHRF1Q9P1Y6 1649 aaKnown RBP1.17□□□□□ -2.22
SNHG1-210ENST00000539303 SNRNP200O75643 2136 aaKnown RBP1.16□□□□□ -2.22
SNHG1-210ENST00000539303 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 MED13Q9UHV7 2174 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 LOC101927531A0A1B0GV80 90 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 CATR1Q13166 79 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 Q6AWC8 147 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 MRPL54Q6P161 138 aaKnown RBP1.16□□□□□ -2.22
SNHG1-210ENST00000539303 TSKUQ8WUA8 353 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 IFI27L1Q96BM0 104 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 RPRMQ9NS64 109 aa1.16□□□□□ -2.22
SNHG1-210ENST00000539303 KTN1Q86UP2 1357 aaKnown RBP1.16□□□□□ -2.22
SNHG1-210ENST00000539303 DLG5Q8TDM6 1919 aa1.15□□□□□ -2.22
SNHG1-210ENST00000539303 NCR3O14931 201 aa1.15□□□□□ -2.23
SNHG1-210ENST00000539303 CBLN1P23435 193 aa1.15□□□□□ -2.23
SNHG1-210ENST00000539303 C9orf116Q5BN46 136 aaPredicted RBP1.15□□□□□ -2.23
SNHG1-210ENST00000539303 C9orf153Q5TBE3 101 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 1039.6 ms