RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FAM162BQ5T6X4 162 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 SPATA31B1PQ5VZV4 182 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 PATE2Q6UY27 113 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 Q6ZN92 141 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 PQLC2Q6ZP29 291 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 Q8N976 141 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 BORCS7Q96B45 105 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 SMAD5-AS1Q9Y6J3 95 aa3.2□□□□□ -1.9
SNHG1-208ENST00000538266 NOTCH3Q9UM47 2321 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 F2Z2F3 143 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 K7EQG2 157 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 CD7P09564 240 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 ZNF688P0C7X2 276 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 IGLC2P0DOY2 106 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 IGLC3P0DOY3 106 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 MGST1P10620 155 aaKnown RBP3.19□□□□□ -1.9
SNHG1-208ENST00000538266 TCL1AP56279 114 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 PDE6HQ13956 83 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 DEFB121Q5J5C9 76 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 PSMG4Q5JS54 123 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 IBA57Q5T440 356 aaKnown RBP3.19□□□□□ -1.9
SNHG1-208ENST00000538266 MRPL54Q6P161 138 aaKnown RBP3.19□□□□□ -1.9
SNHG1-208ENST00000538266 MIR17HGQ75NE6 70 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 ATP5L2Q7Z4Y8 100 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 ZNF738Q8NE65 137 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 MRAPQ8TCY5 172 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 DCANP1Q8TF63 244 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 IGF2BP2-AS1Q96M15 143 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 FAM110AQ9BQ89 295 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 SLC50A1Q9BRV3 221 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 PAXXQ9BUH6 204 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 SLC25A2Q9BXI2 301 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 ZNF331Q9NQX6 463 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-208ENST00000538266 TMEM14CQ9P0S9 112 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 LAMTOR2Q9Y2Q5 125 aa3.19□□□□□ -1.9
SNHG1-208ENST00000538266 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
SNHG1-208ENST00000538266 IGLV5-37A0A075B6J1 123 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 TRBV19A0A075B6N1 114 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 TRAV9-2A0A087WT02 112 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 A0A087X0K7 114 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 TRAV5A0A0B4J249 113 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GGTLC3B5MD39 225 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 H3BTX0 84 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 PEX7O00628 323 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GAGE7O76087 117 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 IGLV2-8P01709 118 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 IGHV4-30-4P0DP06 118 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 PYYP10082 97 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 HIST1H1EP10412 219 aaKnown RBP3.18□□□□□ -1.9
SNHG1-208ENST00000538266 NTF3P20783 257 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 CSN1S1P47710 185 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 DEFB131AP59861 70 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 UBE2G1P62253 170 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 PSG9Q00887 426 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 GAGE4Q13068 117 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 TDRG1Q3Y452 100 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 EBLN2Q6P2I7 272 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 NIT1Q86X76 327 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 APRG1Q8IVJ8 170 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 STHQ8IWL8 128 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 RNF182Q8N6D2 247 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 OR2D3Q8NGH3 330 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 C18orf32Q8TCD1 76 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 TSKUQ8WUA8 353 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 SMIM12Q96EX1 92 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 FAM167A-AS1Q96KT0 104 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 RCHY1Q96PM5 261 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 RNASE7Q9H1E1 156 aaKnown RBP3.18□□□□□ -1.9
SNHG1-208ENST00000538266 CLEC5AQ9NY25 188 aa3.18□□□□□ -1.9
SNHG1-208ENST00000538266 SORL1Q92673 2214 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 LOC102724200A0A096LPH7 203 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-208ENST00000538266 K7EIL1 84 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 M0R2Z0 102 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 SOCS3O14543 225 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 MRPS12O15235 138 aaKnown RBP3.17□□□□□ -1.9
SNHG1-208ENST00000538266 SPINK4O60575 86 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 HSBP1O75506 76 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 FRMD6-AS1P0C7T7 363 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
SNHG1-208ENST00000538266 TSPOP30536 169 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 APOC4P55056 127 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 HIST1H1AQ02539 215 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-208ENST00000538266 PSG3Q16557 428 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 KIAA1644Q3SXP7 199 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 RNASEKQ6P5S7 137 aaKnown RBP3.17□□□□□ -1.9
SNHG1-208ENST00000538266 FOXI2Q6ZQN5 318 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
SNHG1-208ENST00000538266 DEFB125Q8N687 156 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms