RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GNRH2O43555 120 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 ARL6IP5O75915 188 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 PMP2P02689 132 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 IL5P05113 134 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 UCHL1P09936 223 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 RAB2AP61019 212 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 AARDQ4LEZ3 155 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 MPV17L2Q567V2 206 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 NMSQ5H8A3 153 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 PRR9Q5T870 116 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 LPCAT3Q6P1A2 487 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
YBX3-205ENST00000536107 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 YIPF6Q96EC8 236 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 AGPAT4-IT1Q9H0P7 198 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 RPP21Q9H633 154 aaKnown RBP2.19□□□□□ -2.06
YBX3-205ENST00000536107 IFT46Q9NQC8 304 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 U3KQ87 197 aa2.19□□□□□ -2.06
YBX3-205ENST00000536107 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 EFCAB10A6NFE3 127 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 SMIM1B2RUZ4 78 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 H7C423 109 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 VCYO14598 125 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 EI24O14681 340 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 SCGNO76038 276 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 NMBP08949 121 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 HIST1H1EP10412 219 aaKnown RBP2.18□□□□□ -2.06
YBX3-205ENST00000536107 CRISP2P16562 243 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 CAMLGP49069 296 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 PKIAP61925 76 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 RAB11AP62491 216 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 AKR1C1Q04828 323 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 SURF2Q15527 256 aaPredicted RBP2.18□□□□□ -2.06
YBX3-205ENST00000536107 GAGE2EQ4V326 116 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 GAGE2AQ6NT46 116 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 TMEM182Q6ZP80 229 aaPredicted RBP2.18□□□□□ -2.06
YBX3-205ENST00000536107 BPIFA4PQ86YQ2 179 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 KIR2DL4Q99706 377 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 ARL6Q9H0F7 186 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 FXYD6Q9H0Q3 95 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 MIXL1Q9H2W2 232 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 GAGE2DQ9UEU5 116 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 RABL2BQ9UNT1 228 aa2.18□□□□□ -2.06
YBX3-205ENST00000536107 TRAV18A0A075B6X5 111 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 A0A0G2JRQ6 117 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 TCRBV3S1A0A5B6 114 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 SMCO3A2RU48 225 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 M0R3E3 92 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 PDCD5O14737 125 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 CTDSPLO15194 276 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 LINC00869P0C866 280 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 GZMBP10144 247 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 PIGPP57054 158 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 REG3AQ06141 175 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 SP6Q3SY56 376 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 C9orf116Q5BN46 136 aaPredicted RBP2.17□□□□□ -2.06
YBX3-205ENST00000536107 LAIR2Q6ISS4 152 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 KRTAP26-1Q6PEX3 210 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 ZFAND2AQ8N6M9 145 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 DTD1Q8TEA8 209 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 TSKUQ8WUA8 353 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 RAB2BQ8WUD1 216 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 APH1BQ8WW43 257 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 UFD1Q92890 307 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 FAM19A4Q96LR4 140 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 UBE2D4Q9Y2X8 147 aa2.17□□□□□ -2.06
YBX3-205ENST00000536107 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 IGKV2-40A0A087WW87 121 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 TRAV8-4A0A0B4J246 113 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 C3orf85A0A1B0GTC6 90 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 LOC100130705A0A1B0GUX0 176 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 FAM24AA6NFZ4 105 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 IFITM5A6NNB3 132 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 PTTG1O95997 202 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 IGKV2D-40P01614 121 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 P01737 135 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 LINC00694P0DN24 101 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 TAS2R46P59540 309 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 SNRPEP62304 92 aaKnown RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 RBX1P62877 108 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 UBE2BP63146 152 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 RPL24P83731 157 aaKnown RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 GAGE6Q13070 117 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 LGALSLQ3ZCW2 172 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 CYP2G1PQ6ZSU1 146 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 FP248Q71RG6 208 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 LINC00305Q7Z4B0 112 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 C14orf178Q8N769 122 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 C15orf56Q8N910 161 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.16□□□□□ -2.06
YBX3-205ENST00000536107 OR10G7Q8NGN6 311 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 TP53RKQ96S44 253 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 MGLLQ99685 303 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 FAM107BQ9H098 131 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 PLCXD1Q9NUJ7 323 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 CACFD1Q9UGQ2 172 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 GPR132Q9UNW8 380 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 PHLDA3Q9Y5J5 127 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 TIMM9Q9Y5J7 89 aa2.16□□□□□ -2.06
YBX3-205ENST00000536107 TRAV6A0A075B6T7 132 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms