RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 I3L2K1 104 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 FGF6P10767 208 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 UTF1Q5T230 341 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 C1orf159Q96HA4 380 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 IGHV4OR15-8A0A075B7B6 117 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 A0A087WW49 117 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 C2orf70A6NJV1 201 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 LY6G6DO95868 133 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRR20EP86478 221 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRR20CP86479 221 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRR20DP86480 221 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRR20BP86481 221 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 PRR20AP86496 221 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 C11orf52Q96A22 123 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 TMEM243Q9BU79 118 aa8.78□□□□□ -1
AMBRA1-211ENST00000533727 K7EIM0 57 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 PRIMA1Q86XR5 153 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 Q8N8P6 123 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 SOCS3O14543 225 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 C16orf54Q6UWD8 224 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 C2orf66Q6UXQ4 117 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 A0A087WWL8 130 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 K7ERJ3 54 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 IL15RAQ13261 267 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 C6orf226Q5I0X4 101 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 MED13LQ71F56 2210 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 IGHG4P01861 327 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 ATP5G1P05496 136 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 LYPD6Q86Y78 171 aa8.77□□□□□ -1.01
AMBRA1-211ENST00000533727 SPG11Q96JI7 2443 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 MORN5Q5VZ52 161 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 C15orf53Q8NAA6 179 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 I3L3M4 83 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 CCL18P55774 89 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 ATRXP46100 2492 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 NUP210LQ5VU65 1888 aa8.76□□□□□ -1.01
AMBRA1-211ENST00000533727 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 CTSGP08311 255 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 SIGLEC8Q9NYZ4 499 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 MRPL35Q9NZE8 188 aaKnown RBP8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 NCKAP5O14513 1909 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 IGF1P05019 195 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 MRPL51Q4U2R6 128 aaKnown RBP8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 PLCE1Q9P212 2302 aa8.75□□□□□ -1.01
AMBRA1-211ENST00000533727 F8VRH5 84 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 CFHR3Q02985 330 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 FXYD5Q96DB9 178 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 IGLV2-23P01705 113 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 MRPL23Q16540 153 aaKnown RBP8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 EP400Q96L91 3159 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 TP53TG1Q9Y2A0 90 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 SHANK1Q9Y566 2161 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 WIPF3A6NGB9 483 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 TMEM141Q96I45 108 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 ARFGEF3Q5TH69 2177 aa8.74□□□□□ -1.01
AMBRA1-211ENST00000533727 IGF2BP2-AS1Q96M15 143 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 ZNF747Q9BV97 191 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 ICOSQ9Y6W8 199 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 TEX22C9J3V5 150 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 ZNRF2Q8NHG8 242 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 TMEM126AQ9H061 195 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 PTPN13Q12923 2485 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 CGB3P0DN86 165 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 CGB7P0DN87 165 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 HLA-DRB4P13762 266 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 HILS1P60008 231 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 HLA-DRB4X5D2U9 266 aa8.73□□□□□ -1.01
AMBRA1-211ENST00000533727 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 CARD19Q96LW7 228 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 PCDH15Q96QU1 1955 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 NPYP01303 97 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 EBI3Q14213 229 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 BUB3O43684 328 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 ODF3L1Q8IXM7 274 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
AMBRA1-211ENST00000533727 LGALS9O00182 355 aa8.71□□□□□ -1.01
AMBRA1-211ENST00000533727 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.01
AMBRA1-211ENST00000533727 IGF2RP11717 2491 aa8.71□□□□□ -1.01
AMBRA1-211ENST00000533727 TRAV13-1A0A0B4J241 112 aa8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 CFHR4Q92496 578 aa8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 DKK2Q9UBU2 259 aa8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 U3KQE9 123 aa8.71□□□□□ -1.02
AMBRA1-211ENST00000533727 WI2-2373I1.2A0A1W2PRP0 233 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 C22orf34Q6ZV56 151 aa8.7□□□□□ -1.02
AMBRA1-211ENST00000533727 NAV2Q8IVL1 2488 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms