RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 HOXD3P31249 432 aaPredicted RBP9.62□□□□□ -0.87
RAD50-209ENST00000533482 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
RAD50-209ENST00000533482 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
RAD50-209ENST00000533482 VPREB3Q9UKI3 123 aa9.62□□□□□ -0.87
RAD50-209ENST00000533482 LINC01619G3V211 115 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 C1orf159Q96HA4 380 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 CPAMD8Q8IZJ3 1885 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 SLURP1P55000 103 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 ANKRD39Q53RE8 183 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
RAD50-209ENST00000533482 ESDP10768 282 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 UNQ9165/PRO28630Q6UXU0 137 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 WI2-2373I1.2A0A1W2PRP0 233 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 PRORYQ9H606 182 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 H3BRM9 83 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 BVES-AS1Q5T3Y7 98 aa9.6□□□□□ -0.87
RAD50-209ENST00000533482 MAP1AP78559 2803 aaPredicted RBP9.6□□□□□ -0.87
RAD50-209ENST00000533482 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 MRPL52Q86TS9 123 aaKnown RBP9.59□□□□□ -0.87
RAD50-209ENST00000533482 ZNF625Q96I27 306 aaPredicted RBP9.59□□□□□ -0.87
RAD50-209ENST00000533482 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 K7ERJ3 54 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 CDKN1BP46527 198 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
RAD50-209ENST00000533482 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
RAD50-209ENST00000533482 K7EMI3 77 aa9.59□□□□□ -0.88
RAD50-209ENST00000533482 LOXL1Q08397 574 aaPredicted RBP9.59□□□□□ -0.88
RAD50-209ENST00000533482 J3QLI3 93 aa9.58□□□□□ -0.88
RAD50-209ENST00000533482 INSP01308 110 aa9.58□□□□□ -0.88
RAD50-209ENST00000533482 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
RAD50-209ENST00000533482 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
RAD50-209ENST00000533482 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
RAD50-209ENST00000533482 IGHV1OR15-1A0A075B7D0 117 aa9.58□□□□□ -0.88
RAD50-209ENST00000533482 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
RAD50-209ENST00000533482 ANKRD17O75179 2603 aaKnown RBP9.58□□□□□ -0.88
RAD50-209ENST00000533482 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
RAD50-209ENST00000533482 ELANEP08246 267 aa9.57□□□□□ -0.88
RAD50-209ENST00000533482 LY6G5BQ8NDX9 201 aa9.57□□□□□ -0.88
RAD50-209ENST00000533482 MLST8Q9BVC4 326 aa9.57□□□□□ -0.88
RAD50-209ENST00000533482 HECTD1Q9ULT8 2610 aa9.57□□□□□ -0.88
RAD50-209ENST00000533482 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
RAD50-209ENST00000533482 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
RAD50-209ENST00000533482 ERG28Q9UKR5 140 aa9.56□□□□□ -0.88
RAD50-209ENST00000533482 EXPH5Q8NEV8 1989 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 F8VRH5 84 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 AMTNQ6UX39 209 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 SPEGQ15772 3267 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 GAGE1Q13065 139 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 GAGE4Q13068 117 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 GAGE5Q13069 117 aa9.55□□□□□ -0.88
RAD50-209ENST00000533482 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 A0A1W2PPR1 153 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 C2orf70A6NJV1 201 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 GAGE7O76087 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 GAGE12FP0CL80 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 GAGE12GP0CL81 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 GAGE12IP0CL82 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 MBD6Q96DN6 1003 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 RNF114Q9Y508 228 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 IGHV4OR15-8A0A075B7B6 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 A0A087WW49 117 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 DNAL4O96015 105 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 CRYGBP07316 175 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 TRPT1Q86TN4 253 aaKnown RBP9.54□□□□□ -0.88
RAD50-209ENST00000533482 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
RAD50-209ENST00000533482 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 ODF3BA8MYP8 253 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 ETDBQ3ZM63 59 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 A0A087WX48 190 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 PMVKQ15126 192 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 GTSF1LQ9H1H1 148 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 LINC01549A6NIU2 74 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 CCL25O15444 150 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
RAD50-209ENST00000533482 PAX2Q02962 417 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
RAD50-209ENST00000533482 C9orf118A6NHY6 69 aa9.52□□□□□ -0.88
RAD50-209ENST00000533482 OCIAD2Q56VL3 154 aa9.52□□□□□ -0.88
RAD50-209ENST00000533482 C11orf71Q6IPW1 123 aa9.52□□□□□ -0.88
RAD50-209ENST00000533482 WFDC11Q8NEX6 87 aa9.52□□□□□ -0.88
RAD50-209ENST00000533482 IGHG2P01859 326 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms