RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 S100A4P26447 101 aaKnown RBP11.98□□□□□ -0.49
PCF11-206ENST00000533018 SAPCD1Q5SSQ6 148 aa11.98□□□□□ -0.49
PCF11-206ENST00000533018 C9orf85Q96MD7 179 aa11.98□□□□□ -0.49
PCF11-206ENST00000533018 HERC1Q15751 4861 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 PTTG1O95997 202 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 IFNA7P01567 189 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 MGST1P10620 155 aaKnown RBP11.97□□□□□ -0.49
PCF11-206ENST00000533018 ATP6V0E2Q8NHE4 81 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 FRZBQ92765 325 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
PCF11-206ENST00000533018 BORCS7-ASMTA0A0B4J1R7 106 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 TRAV34A0A0B4J273 112 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 LGALSLQ3ZCW2 172 aaPredicted RBP11.96□□□□□ -0.49
PCF11-206ENST00000533018 Q5BKY6 102 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 LELP1Q5T871 98 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 RPL7L1Q6DKI1 246 aaKnown RBP11.96□□□□□ -0.49
PCF11-206ENST00000533018 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
PCF11-206ENST00000533018 FXYD6-FXYD2A0A087WZ82 144 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 SMR3BP02814 79 aaPredicted RBP11.95□□□□□ -0.5
PCF11-206ENST00000533018 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
PCF11-206ENST00000533018 UBE2G2P60604 165 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 Q5VSD8 79 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 BATF3Q9NR55 127 aa11.95□□□□□ -0.5
PCF11-206ENST00000533018 ASIPP42127 132 aa11.94□□□□□ -0.5
PCF11-206ENST00000533018 PTH2Q96A98 100 aa11.94□□□□□ -0.5
PCF11-206ENST00000533018 ARL2-SNX15V9GYD0 113 aa11.94□□□□□ -0.5
PCF11-206ENST00000533018 LRCOL1A6NCL2 159 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 FABP5P3A8MUU1 101 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GIPP09681 153 aaPredicted RBP11.93□□□□□ -0.5
PCF11-206ENST00000533018 HAMPP81172 84 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GAGE1Q13065 139 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GAGE4Q13068 117 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GAGE5Q13069 117 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 OR2T35Q8NGX2 323 aa11.93□□□□□ -0.5
PCF11-206ENST00000533018 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
PCF11-206ENST00000533018 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
PCF11-206ENST00000533018 A8MWV9 139 aa11.92□□□□□ -0.5
PCF11-206ENST00000533018 FGF8P55075 233 aaPredicted RBP11.92□□□□□ -0.5
PCF11-206ENST00000533018 Q8N814 137 aa11.92□□□□□ -0.5
PCF11-206ENST00000533018 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
PCF11-206ENST00000533018 PARLQ9H300 379 aa11.92□□□□□ -0.5
PCF11-206ENST00000533018 B4DEV8 164 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 PEX7O00628 323 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 ZNF726P1Q15940 193 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 AKR1C8PQ5T2L2 129 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 ZFP2Q6ZN57 461 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 Q6ZSN1 163 aa11.91□□□□□ -0.5
PCF11-206ENST00000533018 SRRM2Q9UQ35 2752 aaKnown RBP11.91□□□□□ -0.5
PCF11-206ENST00000533018 RNF222A6NCQ9 220 aa11.9□□□□□ -0.5
PCF11-206ENST00000533018 Q86TA4 180 aa11.9□□□□□ -0.5
PCF11-206ENST00000533018 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
PCF11-206ENST00000533018 JPT2Q9H910 190 aa11.9□□□□□ -0.5
PCF11-206ENST00000533018 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
PCF11-206ENST00000533018 FAM229AH3BQW9 127 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 H3BVH4 76 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 M0R036 132 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 SYT8Q8NBV8 401 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 NKX6-2Q9C056 277 aaPredicted RBP11.89□□□□□ -0.51
PCF11-206ENST00000533018 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 VPS13BQ7Z7G8 4022 aa11.89□□□□□ -0.51
PCF11-206ENST00000533018 GRIFINA4D1Z8 144 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 FAM74A7A6NL05 159 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 LAGE3Q14657 143 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 PIK3CD-AS1Q5SR53 167 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 Q8N3U1 123 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 SAMD10Q9BYL1 202 aa11.88□□□□□ -0.51
PCF11-206ENST00000533018 ARMS2P0C7Q2 107 aa11.87□□□□□ -0.51
PCF11-206ENST00000533018 UBE2G1P62253 170 aa11.87□□□□□ -0.51
PCF11-206ENST00000533018 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
PCF11-206ENST00000533018 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
PCF11-206ENST00000533018 ZC2HC1AQ96GY0 325 aa11.87□□□□□ -0.51
PCF11-206ENST00000533018 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
PCF11-206ENST00000533018 MYCBP2O75592 4640 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 DAZ4Q86SG3 579 aaKnown RBP11.86□□□□□ -0.51
PCF11-206ENST00000533018 OR11H4Q8NGC9 324 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 DAZ3Q9NR90 486 aaKnown RBP11.86□□□□□ -0.51
PCF11-206ENST00000533018 Q9UF83 564 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 URGCP-MRPS24S4R325 110 aa11.86□□□□□ -0.51
PCF11-206ENST00000533018 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 A0A087WWC5 75 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 MAP1LC3B2A6NCE7 125 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 RHODO00212 210 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 LECT2O14960 151 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 SH2D1AO60880 128 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 CRIP1P50238 77 aa11.85□□□□□ -0.51
PCF11-206ENST00000533018 TOR2AQ5JU69 321 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms