RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LEPP41159 167 aa4.36□□□□□ -1.71
CSDE1-213ENST00000530784 ESRGQ1W209 222 aa4.36□□□□□ -1.71
CSDE1-213ENST00000530784 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
CSDE1-213ENST00000530784 ZNF586Q9NXT0 402 aa4.36□□□□□ -1.71
CSDE1-213ENST00000530784 PXMP4Q9Y6I8 212 aa4.36□□□□□ -1.71
CSDE1-213ENST00000530784 TRGV2A0A075B6R0 118 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 A0A096LPF7 62 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 TRAV12-3A0A0B4J271 114 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 AGPAT2O15120 278 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 INPP1P49441 399 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 LINC00315P59091 139 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 TAS2R30P59541 319 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 DAZ2Q13117 558 aaKnown RBP4.35□□□□□ -1.71
CSDE1-213ENST00000530784 GUK1Q16774 197 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 IAH1Q2TAA2 248 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-213ENST00000530784 C10orf113Q5VZT2 155 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 Q6ZTI0 123 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 ZNF680Q8NEM1 530 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 MGST2Q99735 147 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 GGACTQ9BVM4 153 aa4.35□□□□□ -1.71
CSDE1-213ENST00000530784 LINC00854A0A1B0GVQ3 168 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 NAP1L6A6NFF2 107 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 FAM74A7A6NL05 159 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 H3BQ15 152 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 NDUFB6O95139 128 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 OR4E1P0C645 316 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 CAMLGP49069 296 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 RAB31Q13636 194 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 FAM74A3Q4VXF1 159 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 TRIQKQ629K1 86 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 ZNF431Q8TF32 576 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-213ENST00000530784 S100ZQ8WXG8 99 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 GSKIPQ9P0R6 139 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 FLVCR2Q9UPI3 526 aa4.34□□□□□ -1.71
CSDE1-213ENST00000530784 RCL1Q9Y2P8 373 aaKnown RBP4.34□□□□□ -1.71
CSDE1-213ENST00000530784 TRGV1A0A0A0MS02 117 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 C7orf66A4D0T2 115 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 C7orf71A4D174 169 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 L7N2F9 121 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 SIVA1O15304 175 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 SLC25A5P05141 298 aaKnown RBP4.33□□□□□ -1.72
CSDE1-213ENST00000530784 CAV2P51636 162 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 SPANXN2Q5MJ10 180 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 MIC13Q5XKP0 118 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-213ENST00000530784 C11orf72Q8NBR9 251 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 PFDN5Q99471 154 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 SRRQ9GZT4 340 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 FUT9Q9Y231 359 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 ICOSQ9Y6W8 199 aa4.33□□□□□ -1.72
CSDE1-213ENST00000530784 MUC4Q99102 2169 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 TRBV19A0A075B6N1 114 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 CENPXA8MT69 81 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 F8WDY8 70 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 M0R3E3 92 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 BCAP31P51572 246 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 TCL1AP56279 114 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 BTN1A1Q13410 526 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 ZNF846Q147U1 533 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 IBA57Q5T440 356 aaKnown RBP4.32□□□□□ -1.72
CSDE1-213ENST00000530784 C12orf45Q8N5I9 185 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-213ENST00000530784 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
CSDE1-213ENST00000530784 MITD1Q8WV92 249 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 UQCC1Q9NVA1 299 aa4.32□□□□□ -1.72
CSDE1-213ENST00000530784 LSM5Q9Y4Y9 91 aaKnown RBP4.32□□□□□ -1.72
CSDE1-213ENST00000530784 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 UBE2L5PA0A1B0GUS4 154 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 FAM25EA8MYX2 175 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 SPINK4O60575 86 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 MPDU1O75352 247 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 ZNF324O75467 553 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-213ENST00000530784 CST7O76096 145 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 IFNA5P01569 189 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 IGHV3-53P01767 116 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 GPX1P07203 203 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-213ENST00000530784 BTCP35070 178 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 FUSP35637 526 aaKnown RBP eCLIP4.31□□□□□ -1.722e-9■□□□□ 9
CSDE1-213ENST00000530784 BAXQ07812 192 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 ERCC8Q13216 396 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 PDE6HQ13956 83 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 Q5VSD8 79 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 LYPD1Q8N2G4 141 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 FRZBQ92765 325 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 FAM19A4Q96LR4 140 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 LINC00477Q96M19 166 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 C20orf85Q9H1P6 137 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 SLC39A9Q9NUM3 307 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 MRPL16Q9NX20 251 aaKnown RBP4.31□□□□□ -1.72
CSDE1-213ENST00000530784 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 PRO0255Q9UI72 69 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 PRELID1Q9Y255 219 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 KLF12Q9Y4X4 402 aa4.31□□□□□ -1.72
CSDE1-213ENST00000530784 TIMM9Q9Y5J7 89 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms