RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 KCNRGQ8N5I3 272 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 OR11H4Q8NGC9 324 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 FAM213BQ8TBF2 198 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 ZNF471Q9BX82 626 aaPredicted RBP7.64□□□□□ -1.19
SF3B2-208ENST00000529994 ARL2-SNX15V9GYD0 113 aa7.64□□□□□ -1.19
SF3B2-208ENST00000529994 TRAV9-2A0A087WT02 112 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 IGHV3-73A0A0B4J1V6 119 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 KANTRA0A1W2PQU2 76 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 FAM74A7A6NL05 159 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
SF3B2-208ENST00000529994 PFN1P07737 140 aaKnown RBP7.63□□□□□ -1.19
SF3B2-208ENST00000529994 SRIP30626 198 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 SLAQ13239 276 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
SF3B2-208ENST00000529994 CST9LP1Q5W188 147 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 Q86TA4 180 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 WFDC10BQ8IUB3 73 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 RASL10AQ92737 203 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 FAM30AQ9NZY2 134 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
SF3B2-208ENST00000529994 K7EQD1 137 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 BCL2L11O43521 198 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 PFDN1O60925 122 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 ZNF345Q14585 488 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 NHLRC2Q8NBF2 726 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 TMEM70Q9BUB7 260 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 HMCN2Q8NDA2 5059 aa7.62□□□□□ -1.19
SF3B2-208ENST00000529994 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
SF3B2-208ENST00000529994 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
SF3B2-208ENST00000529994 M0R036 132 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
SF3B2-208ENST00000529994 AKR1C3P42330 323 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 UBE2G1P62253 170 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 NEGR1Q7Z3B1 354 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 SFT2D1Q8WV19 159 aa7.61□□□□□ -1.19
SF3B2-208ENST00000529994 A0A0D9SG52 128 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 HMSDA8MTL9 139 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 PSCAO43653 123 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 PAGE4O60829 102 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 ORM1P02763 201 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 PLA2G1BP04054 148 aaKnown RBP7.6□□□□□ -1.19
SF3B2-208ENST00000529994 EVI2AP22794 236 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 ZNF506Q5JVG8 444 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 SERTAD4-AS1Q5TG53 156 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 DPPA3Q6W0C5 159 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 HIST1H2BAQ96A08 127 aa7.6□□□□□ -1.19
SF3B2-208ENST00000529994 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 IGKV3D-20A0A0C4DH25 116 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 GRIFINA4D1Z8 144 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 B4DEV8 164 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 H3BVH4 76 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 SH2D1AO60880 128 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 CRYGDP07320 174 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 SEC11BP0C7V7 166 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.19
SF3B2-208ENST00000529994 ASIPP42127 132 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 LGALSLQ3ZCW2 172 aaPredicted RBP7.59□□□□□ -1.19
SF3B2-208ENST00000529994 CFAP126Q5VTH2 177 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 TMUB2Q71RG4 321 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 ZC2HC1AQ96GY0 325 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 C9orf85Q96MD7 179 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 TXNDC17Q9BRA2 123 aa7.59□□□□□ -1.19
SF3B2-208ENST00000529994 NKX6-2Q9C056 277 aaPredicted RBP7.59□□□□□ -1.19
SF3B2-208ENST00000529994 FABP5P3A8MUU1 101 aa7.58□□□□□ -1.2
SF3B2-208ENST00000529994 RS1O15537 224 aa7.58□□□□□ -1.2
SF3B2-208ENST00000529994 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
SF3B2-208ENST00000529994 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-208ENST00000529994 FMC1Q96HJ9 113 aa7.58□□□□□ -1.2
SF3B2-208ENST00000529994 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 UMAD1C9J7I0 102 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 TPT1P13693 172 aaKnown RBP7.57□□□□□ -1.2
SF3B2-208ENST00000529994 EIF5AP63241 154 aaKnown RBP7.57□□□□□ -1.2
SF3B2-208ENST00000529994 Q8N814 137 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 DEFB104AQ8WTQ1 72 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 PRADC1Q9BSG0 188 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 Q9HAA7 133 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 PLA2G2DQ9UNK4 145 aa7.57□□□□□ -1.2
SF3B2-208ENST00000529994 hCG_2014768A0A024R1R8 64 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 CRIP1P50238 77 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 RHOHQ15669 191 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 FAM162BQ5T6X4 162 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 MBD3L1Q8WWY6 194 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 JPT2Q9H910 190 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
SF3B2-208ENST00000529994 KRBOX1C9JBD0 128 aa7.55□□□□□ -1.2
SF3B2-208ENST00000529994 K7EP13 123 aa7.55□□□□□ -1.2
SF3B2-208ENST00000529994 LTAP01374 205 aa7.55□□□□□ -1.2
SF3B2-208ENST00000529994 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
SF3B2-208ENST00000529994 FAM74A4Q5TZK3 123 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms