RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 TMUB2Q71RG4 321 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 LINC00305Q7Z4B0 112 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 ARL6IP6Q8N6S5 226 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 LINC00612Q8N6U2 182 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 C18orf15Q96N68 181 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 C20orf144Q9BQM9 153 aa3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 GPN1Q9HCN4 374 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 ZNF331Q9NQX6 463 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-239ENST00000523685 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 A0A087WTM6 91 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 A0A0D9SG52 128 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 C9orf170A2RU37 121 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 E5RGE8 158 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 MRPS12O15235 138 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 BCL2L11O43521 198 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 RNASE4P34096 147 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 PLP1P60201 277 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 DAZ2Q13117 558 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 ERCC8Q13216 396 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 C10orf113Q5VZT2 155 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 Q6ZRP5 223 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 BPIFA4PQ86YQ2 179 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 OR10P1Q8NGE3 313 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 C2orf48Q96LS8 159 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC50A1Q9BRV3 221 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 NPVFQ9HCQ7 196 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 FUT9Q9Y231 359 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 KLF12Q9Y4X4 402 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 ICOSQ9Y6W8 199 aa3.55□□□□□ -1.84
CTNNA1-239ENST00000523685 TRAV9-2A0A087WT02 112 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 TRAV5A0A0B4J249 113 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 TMEM218A2RU14 115 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 C7orf71A4D174 169 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 RNF222A6NCQ9 220 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 H3BQ15 152 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 AGPAT2O15120 278 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 NDUFB6O95139 128 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 SIX6O95475 246 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 ADCYAP1P18509 176 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 CYCSP99999 105 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 FAM74A1Q5RGS3 127 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 ZNF546Q86UE3 836 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 C15orf54Q8N8G6 183 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 STOML3Q8TAV4 291 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 PYGO2Q9BRQ0 406 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 SEC11CQ9BY50 192 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 NIT2Q9NQR4 276 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 MRPL16Q9NX20 251 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 GSKIPQ9P0R6 139 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 RNF24Q9Y225 148 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 PXMP4Q9Y6I8 212 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 LY96Q9Y6Y9 160 aa3.54□□□□□ -1.84
CTNNA1-239ENST00000523685 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 FXYD6-FXYD2A0A087WZ82 144 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 C1orf196B1AJZ1 125 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 M0R3E3 92 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 ARPC5O15511 151 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 PSCAO43653 123 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 MPDU1O75352 247 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 ZNF324O75467 553 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 GPX1P07203 203 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 IGLC2P0DOY2 106 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 EVI2AP22794 236 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 PEA15Q15121 130 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 MRPL23Q16540 153 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 ZC2HC1BQ5TFG8 222 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 LYPD5Q6UWN5 251 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 TMEM14EPQ6UXP3 125 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 WFDC10BQ8IUB3 73 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 KCNRGQ8N5I3 272 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 C11orf72Q8NBR9 251 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 TMEM37Q8WXS4 190 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 SMIM8Q96KF7 97 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 MGST2Q99735 147 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 OPRPNQ99935 248 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 SLC25A21Q9BQT8 299 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 LINC00467Q9BRT7 94 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 C2orf88Q9BSF0 95 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 PRO0255Q9UI72 69 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 TP53TG3Q9ULZ0 132 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 FLVCR2Q9UPI3 526 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 HHLA3Q9XRX5 114 aa3.53□□□□□ -1.84
CTNNA1-239ENST00000523685 IGLV7-46A0A075B6I9 117 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 IGKV2-40A0A087WW87 121 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 A0A087WZ39 114 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 TRGV4A0A0C4DH28 118 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 COLCA2A8K830 154 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 FNDC10F2Z333 226 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 K7EPK0 472 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 SPINK4O60575 86 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 IGKV2D-40P01614 121 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 CRYGDP07320 174 aa3.52□□□□□ -1.85
CTNNA1-239ENST00000523685 OR4E1P0C645 316 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms