RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 COL4A3Q01955 1670 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 LAMA4Q16363 1823 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 IGHV3-21A0A0B4J1V1 117 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 IGHV7-4-1A0A0J9YVY3 117 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 LINC01548A6NM66 108 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 H3BMM0 161 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 IGLV3-25P01717 112 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 FXYD2P54710 66 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 UBE2D3P61077 147 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 UBE2D2P62837 147 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 FAM19A2Q8N3H0 131 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 DYNLRB2Q8TF09 96 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 Q96M85 177 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 GABARAPL1Q9H0R8 117 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 DYNLRB1Q9NP97 96 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 SMAD5-AS1Q9Y6J3 95 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 PAPPAQ13219 1627 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 KIAA1549LQ6ZVL6 1849 aa4.42□□□□□ -1.7
NPM1-211ENST00000523622 COL4A6Q14031 1691 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 MYOFQ9NZM1 2061 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 B4DSR2 109 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 K7ERS5 55 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 SOCS3O14543 225 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 SLC25A20O43772 301 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 NPYP01303 97 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 IGHV1-69P01742 117 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 IL4P05112 153 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 ZNF627Q7L945 461 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 VMO1Q7Z5L0 202 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 Q8N814 137 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 SMIM4Q8WVI0 70 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 PPP1R1CQ8WVI7 109 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 NHP2Q9NX24 153 aaKnown RBP4.41□□□□□ -1.7
NPM1-211ENST00000523622 COL16A1Q07092 1604 aaPredicted RBP4.41□□□□□ -1.7
NPM1-211ENST00000523622 PKD1L3Q7Z443 1732 aa4.41□□□□□ -1.7
NPM1-211ENST00000523622 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.71
NPM1-211ENST00000523622 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
NPM1-211ENST00000523622 Q8IYB0 196 aa4.4□□□□□ -1.71
NPM1-211ENST00000523622 C1orf147Q96MC9 270 aaPredicted RBP4.4□□□□□ -1.71
NPM1-211ENST00000523622 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
NPM1-211ENST00000523622 MRC1P22897 1456 aa4.4□□□□□ -1.71
NPM1-211ENST00000523622 ARHGEF17Q96PE2 2063 aaPredicted RBP4.39□□□□□ -1.71
NPM1-211ENST00000523622 UBR3Q6ZT12 1888 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 FAM208AQ9UK61 1670 aaKnown RBP4.39□□□□□ -1.71
NPM1-211ENST00000523622 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.39□□□□□ -1.71
NPM1-211ENST00000523622 IGKV2D-26A0A0A0MRZ7 120 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 IGHV3-49A0A0A0MS15 119 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 A6NED7 52 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 A8MWP4 228 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 NOVP48745 357 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 DPTQ07507 201 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 MIAQ16674 131 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 NCBP2-AS2Q69YL0 99 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 NMES1Q9C002 83 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 LINC00574Q9H8X3 128 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 GNG13Q9P2W3 67 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 CPS1P31327 1500 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 ABCC8Q09428 1581 aa4.39□□□□□ -1.71
NPM1-211ENST00000523622 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 C3P01024 1663 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 QSER1Q2KHR3 1735 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 MUC22E2RYF6 1773 aaPredicted RBP4.38□□□□□ -1.71
NPM1-211ENST00000523622 TULP4Q9NRJ4 1543 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 GPATCH8Q9UKJ3 1502 aaKnown RBP4.38□□□□□ -1.71
NPM1-211ENST00000523622 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 A0A1B0GWA3 101 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 C17orf51A8MQB3 221 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 IQCF6A8MYZ5 107 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 LECT2O14960 151 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 LY6HO94772 140 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 ZNF117Q03924 483 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 C15orf32Q32M92 178 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 FAM229BQ4G0N7 80 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 LINC00467Q9BRT7 94 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 BPESC1Q9GZL8 116 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
NPM1-211ENST00000523622 RREB1Q92766 1687 aa4.38□□□□□ -1.71
NPM1-211ENST00000523622 MPDZO75970 2070 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 DIDO1Q9BTC0 2240 aaKnown RBP4.37□□□□□ -1.71
NPM1-211ENST00000523622 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 HCG22E2RYF7 251 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 C5orf67F2Z3F1 127 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 IGKV1D-33P01593 117 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 IGKV1-33P01594 117 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 TRGV3P03979 118 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 C9orf106Q8NAJ2 232 aa4.37□□□□□ -1.71
NPM1-211ENST00000523622 SPTSSBQ8NFR3 76 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms