RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TCRAP04437 139 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 ARL14EPLP0DKL9 152 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 ZNF80P51504 273 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 ZFP69Q49AA0 526 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 ZNF506Q5JVG8 444 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 ATP6V0E2Q8NHE4 81 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 TM2D2Q9BX73 214 aa5.93□□□□□ -1.46
CTNNA1-229ENST00000521683 PGPEP1LA6NFU8 196 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 GCGP01275 180 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGLV2-11P01706 119 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGHV3-33P01772 117 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 LINC00694P0DN24 101 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 DEFA1P59665 94 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 DEFA3P59666 94 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 HAMPP81172 84 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 SMUG1Q53HV7 270 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 ZFP2Q6ZN57 461 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 TMEM75Q8N9X5 138 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 SGK494Q96LW2 274 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 PSMG3Q9BT73 122 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 TMEM167BQ9NRX6 74 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 PSG8Q9UQ74 426 aa5.92□□□□□ -1.46
CTNNA1-229ENST00000521683 IGHV3-73A0A0B4J1V6 119 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 GGTLC3B5MD39 225 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 MBP02144 154 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 RNASE3P12724 160 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 GCHFRP30047 84 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 FLI1Q01543 452 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 TOR2AQ5JU69 321 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 Q6ZSA8 131 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 CYB561D1Q8N8Q1 229 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 RAB24Q969Q5 203 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 PARLQ9H300 379 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 EPDR1Q9UM22 224 aa5.91□□□□□ -1.46
CTNNA1-229ENST00000521683 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 A8MWV9 139 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 SUMO1P63165 101 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 SERF2P84101 59 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 SAPCD1Q5SSQ6 148 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 HSD17B11Q8NBQ5 300 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 AQP10Q96PS8 301 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
CTNNA1-229ENST00000521683 HMCN2Q8NDA2 5059 aa5.9□□□□□ -1.47
CTNNA1-229ENST00000521683 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 A0A087WWC5 75 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 A0A1W2PRE2 83 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 CXorf1O96002 111 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 S100A4P26447 101 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 ATP6V0CP27449 155 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 WFDC2Q14508 124 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 UFSP1Q6NVU6 142 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 PRNTQ86SH4 94 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 LINC00479Q96M42 142 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 TNFSF18Q9UNG2 199 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
CTNNA1-229ENST00000521683 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 RHODO00212 210 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 SEC11BP0C7V7 166 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 ASIPP42127 132 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 FGF8P55075 233 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 GAGE1Q13065 139 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 GAGE4Q13068 117 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 GAGE5Q13069 117 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 DNLZQ5SXM8 178 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 Q8N3U1 123 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 RMI2Q96E14 147 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 ACTR3CQ9C0K3 210 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 IL36BQ9NZH7 164 aa5.88□□□□□ -1.47
CTNNA1-229ENST00000521683 FABP5P3A8MUU1 101 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 LGALSLQ3ZCW2 172 aaPredicted RBP5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 DAZ4Q86SG3 579 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 Q86TA4 180 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 DAZ3Q9NR90 486 aaKnown RBP5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 ALG5Q9Y673 324 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 ARL2-SNX15V9GYD0 113 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
CTNNA1-229ENST00000521683 CTXND1A0A1B0GTU2 59 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 KRTAP29-1A8MX34 341 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 B4DEV8 164 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 PEX7O00628 323 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 COX8CQ7Z4L0 72 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 NIT1Q86X76 327 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 C14orf178Q8N769 122 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 OR2T35Q8NGX2 323 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 HIST1H2BAQ96A08 127 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 NKX6-2Q9C056 277 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 JPT2Q9H910 190 aa5.86□□□□□ -1.47
CTNNA1-229ENST00000521683 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-229ENST00000521683 TRAV34A0A0B4J273 112 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms