RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 Q5VSD8 79 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 FRZBQ92765 325 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
PABPC1-215ENST00000520804 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
PABPC1-215ENST00000520804 HERC1Q15751 4861 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 IGLV5-52A0A0A0MRZ9 124 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 IGHV3-30P01768 117 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 IGHV3-33P01772 117 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 IGHV3-30-3P0DP02 117 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 IGHV3-30-5P0DP03 117 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 GTSF1LQ9H1H1 148 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 MED28Q9H204 178 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 Q9HAA7 133 aa13.14□□□□□ -0.31
PABPC1-215ENST00000520804 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
PABPC1-215ENST00000520804 Q5BKY6 102 aa13.13□□□□□ -0.31
PABPC1-215ENST00000520804 Q8N814 137 aa13.13□□□□□ -0.31
PABPC1-215ENST00000520804 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
PABPC1-215ENST00000520804 DNAH8Q96JB1 4490 aa13.12□□□□□ -0.31
PABPC1-215ENST00000520804 VPS13BQ7Z7G8 4022 aa13.12□□□□□ -0.31
PABPC1-215ENST00000520804 IGKV3D-20A0A0C4DH25 116 aa13.12□□□□□ -0.31
PABPC1-215ENST00000520804 PTTG1O95997 202 aa13.12□□□□□ -0.31
PABPC1-215ENST00000520804 PARLQ9H300 379 aa13.12□□□□□ -0.31
PABPC1-215ENST00000520804 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 SMR3BP02814 79 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-215ENST00000520804 LAGE3Q14657 143 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 PIK3CD-AS1Q5SR53 167 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 Q6ZSN1 163 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 TMEM70Q9BUB7 260 aa13.11□□□□□ -0.31
PABPC1-215ENST00000520804 A8MWV9 139 aa13.1□□□□□ -0.31
PABPC1-215ENST00000520804 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
PABPC1-215ENST00000520804 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
PABPC1-215ENST00000520804 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
PABPC1-215ENST00000520804 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-215ENST00000520804 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
PABPC1-215ENST00000520804 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
PABPC1-215ENST00000520804 FABP5P3A8MUU1 101 aa13.09□□□□□ -0.31
PABPC1-215ENST00000520804 GIPP09681 153 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-215ENST00000520804 LINC00694P0DN24 101 aa13.09□□□□□ -0.31
PABPC1-215ENST00000520804 HAMPP81172 84 aa13.09□□□□□ -0.31
PABPC1-215ENST00000520804 LGALSLQ3ZCW2 172 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-215ENST00000520804 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 GAGE12JA6NER3 117 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 IFNA7P01567 189 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 ASIPP42127 132 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 GAGE1Q13065 139 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 GAGE4Q13068 117 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 GAGE5Q13069 117 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 GAGE13Q4V321 117 aa13.08□□□□□ -0.32
PABPC1-215ENST00000520804 PEX7O00628 323 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 UBE2G2P60604 165 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 Q86TA4 180 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 Q8N3U1 123 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 TM2D2Q9BX73 214 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 IL36BQ9NZH7 164 aa13.07□□□□□ -0.32
PABPC1-215ENST00000520804 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 UFSP1Q6NVU6 142 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 OR2T35Q8NGX2 323 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-215ENST00000520804 JPT2Q9H910 190 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 Q9UF83 564 aa13.06□□□□□ -0.32
PABPC1-215ENST00000520804 FXYD6-FXYD2A0A087WZ82 144 aa13.05□□□□□ -0.32
PABPC1-215ENST00000520804 FAM74A7A6NL05 159 aa13.05□□□□□ -0.32
PABPC1-215ENST00000520804 B4DEV8 164 aa13.05□□□□□ -0.32
PABPC1-215ENST00000520804 CRIP1P50238 77 aa13.05□□□□□ -0.32
PABPC1-215ENST00000520804 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
PABPC1-215ENST00000520804 H3BVH4 76 aa13.04□□□□□ -0.32
PABPC1-215ENST00000520804 FGF8P55075 233 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-215ENST00000520804 WFDC2Q14508 124 aa13.04□□□□□ -0.32
PABPC1-215ENST00000520804 DNLZQ5SXM8 178 aa13.04□□□□□ -0.32
PABPC1-215ENST00000520804 DMRTA1Q5VZB9 504 aa13.04□□□□□ -0.32
PABPC1-215ENST00000520804 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-215ENST00000520804 MYCBP2O75592 4640 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 A0A087WWC5 75 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 TRAV8-3A0A0A6YYJ7 113 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 AKR1C8PQ5T2L2 129 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 DAZ4Q86SG3 579 aaKnown RBP13.03□□□□□ -0.32
PABPC1-215ENST00000520804 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 DAZ3Q9NR90 486 aaKnown RBP13.03□□□□□ -0.32
PABPC1-215ENST00000520804 FAM30AQ9NZY2 134 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 ZFP30Q9Y2G7 519 aa13.03□□□□□ -0.32
PABPC1-215ENST00000520804 M0R036 132 aa13.02□□□□□ -0.33
PABPC1-215ENST00000520804 RHODO00212 210 aa13.02□□□□□ -0.33
PABPC1-215ENST00000520804 C1QBP02746 253 aa13.02□□□□□ -0.33
PABPC1-215ENST00000520804 ARMS2P0C7Q2 107 aa13.02□□□□□ -0.33
PABPC1-215ENST00000520804 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
PABPC1-215ENST00000520804 SH2D1AO60880 128 aa13.01□□□□□ -0.33
PABPC1-215ENST00000520804 OR11H4Q8NGC9 324 aa13.01□□□□□ -0.33
PABPC1-215ENST00000520804 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
PABPC1-215ENST00000520804 FAM162BQ5T6X4 162 aa13□□□□□ -0.33
PABPC1-215ENST00000520804 FMC1Q96HJ9 113 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms