RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 K7EQM0 130 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 UPK1BO75841 260 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 TCRAP04437 139 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 GAGE1Q13065 139 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 GAGE4Q13068 117 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 GAGE5Q13069 117 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 PTH2Q96A98 100 aa13.23□□□□□ -0.29
HDAC2-207ENST00000520170 KRTAP29-1A8MX34 341 aaPredicted RBP13.22□□□□□ -0.29
HDAC2-207ENST00000520170 RNASE3P12724 160 aaKnown RBP13.22□□□□□ -0.29
HDAC2-207ENST00000520170 LINC01620Q4KN68 170 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 SMUG1Q53HV7 270 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 PRNTQ86SH4 94 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 DEFB104AQ8WTQ1 72 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 BAALCQ8WXS3 180 aa13.22□□□□□ -0.29
HDAC2-207ENST00000520170 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
HDAC2-207ENST00000520170 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
HDAC2-207ENST00000520170 SH3BGRL3Q9H299 93 aa13.21□□□□□ -0.29
HDAC2-207ENST00000520170 PARLQ9H300 379 aa13.21□□□□□ -0.29
HDAC2-207ENST00000520170 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
HDAC2-207ENST00000520170 FLI1Q01543 452 aaPredicted RBP13.2□□□□□ -0.3
HDAC2-207ENST00000520170 IFITM3Q01628 133 aa13.2□□□□□ -0.3
HDAC2-207ENST00000520170 LGALSLQ3ZCW2 172 aaPredicted RBP13.2□□□□□ -0.3
HDAC2-207ENST00000520170 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
HDAC2-207ENST00000520170 OR2T35Q8NGX2 323 aa13.2□□□□□ -0.3
HDAC2-207ENST00000520170 Q9UF83 564 aa13.2□□□□□ -0.3
HDAC2-207ENST00000520170 GGTLC3B5MD39 225 aa13.19□□□□□ -0.3
HDAC2-207ENST00000520170 GCHFRP30047 84 aa13.19□□□□□ -0.3
HDAC2-207ENST00000520170 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
HDAC2-207ENST00000520170 MARVELD1Q9BSK0 173 aa13.19□□□□□ -0.3
HDAC2-207ENST00000520170 A8MWV9 139 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 STAG3L3P0CL85 134 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 LINC00694P0DN24 101 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 S100A4P26447 101 aaKnown RBP13.18□□□□□ -0.3
HDAC2-207ENST00000520170 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 SAMD10Q9BYL1 202 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 EPDR1Q9UM22 224 aa13.18□□□□□ -0.3
HDAC2-207ENST00000520170 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
HDAC2-207ENST00000520170 SCXQ7RTU7 201 aa13.17□□□□□ -0.3
HDAC2-207ENST00000520170 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
HDAC2-207ENST00000520170 JPT2Q9H910 190 aa13.17□□□□□ -0.3
HDAC2-207ENST00000520170 COX11Q9Y6N1 276 aa13.17□□□□□ -0.3
HDAC2-207ENST00000520170 A0A087WWC5 75 aa13.16□□□□□ -0.3
HDAC2-207ENST00000520170 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
HDAC2-207ENST00000520170 C14orf178Q8N769 122 aaPredicted RBP13.16□□□□□ -0.3
HDAC2-207ENST00000520170 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
HDAC2-207ENST00000520170 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
HDAC2-207ENST00000520170 URGCP-MRPS24S4R325 110 aa13.16□□□□□ -0.3
HDAC2-207ENST00000520170 IGKV3D-20A0A0C4DH25 116 aa13.15□□□□□ -0.3
HDAC2-207ENST00000520170 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
HDAC2-207ENST00000520170 RMI2Q96E14 147 aa13.15□□□□□ -0.3
HDAC2-207ENST00000520170 DNAJC30Q96LL9 226 aa13.15□□□□□ -0.3
HDAC2-207ENST00000520170 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 ASIPP42127 132 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 Q8N976 141 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 LINC00479Q96M42 142 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
HDAC2-207ENST00000520170 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
HDAC2-207ENST00000520170 KLK12Q9UKR0 248 aa13.13□□□□□ -0.31
HDAC2-207ENST00000520170 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
HDAC2-207ENST00000520170 RNF222A6NCQ9 220 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 FABP5P3A8MUU1 101 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 CXorf1O96002 111 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 DMRTA1Q5VZB9 504 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 UFSP1Q6NVU6 142 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 CHAC1Q9BUX1 264 aa13.12□□□□□ -0.31
HDAC2-207ENST00000520170 H3BVH4 76 aa13.11□□□□□ -0.31
HDAC2-207ENST00000520170 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
HDAC2-207ENST00000520170 NIT1Q86X76 327 aa13.11□□□□□ -0.31
HDAC2-207ENST00000520170 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
HDAC2-207ENST00000520170 IL36BQ9NZH7 164 aa13.11□□□□□ -0.31
HDAC2-207ENST00000520170 ARL2-SNX15V9GYD0 113 aa13.11□□□□□ -0.31
HDAC2-207ENST00000520170 B4DEV8 164 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 MBP02144 154 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 CIRBP-AS1Q8TBR5 109 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
HDAC2-207ENST00000520170 ACTR3CQ9C0K3 210 aaPredicted RBP13.1□□□□□ -0.31
HDAC2-207ENST00000520170 RHODO00212 210 aa13.09□□□□□ -0.31
HDAC2-207ENST00000520170 IFNA7P01567 189 aa13.09□□□□□ -0.31
HDAC2-207ENST00000520170 SEC11BP0C7V7 166 aa13.09□□□□□ -0.31
HDAC2-207ENST00000520170 KRTAP10-4P60372 401 aaPredicted RBP13.09□□□□□ -0.31
HDAC2-207ENST00000520170 SERF2P84101 59 aa13.09□□□□□ -0.31
HDAC2-207ENST00000520170 SYT8Q8NBV8 401 aa13.09□□□□□ -0.31
HDAC2-207ENST00000520170 A0A087WX48 190 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 A0A1W2PRE2 83 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 M0R036 132 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 DEFA1P59665 94 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 DEFA3P59666 94 aa13.08□□□□□ -0.32
HDAC2-207ENST00000520170 A0A087WWL8 130 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms