RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 AMTNQ6UX39 209 aa12.49□□□□□ -0.41
PCDHGA11-202ENST00000518882 SPOCK3Q9BQ16 436 aa12.49□□□□□ -0.41
PCDHGA11-202ENST00000518882 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
PCDHGA11-202ENST00000518882 TMEM238C9JI98 176 aa12.48□□□□□ -0.41
PCDHGA11-202ENST00000518882 LGALS1P09382 135 aaKnown RBP12.48□□□□□ -0.41
PCDHGA11-202ENST00000518882 CYSLTR1Q9Y271 337 aa12.48□□□□□ -0.41
PCDHGA11-202ENST00000518882 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
PCDHGA11-202ENST00000518882 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
PCDHGA11-202ENST00000518882 A0A1B0GWB2 263 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 MTURNQ8N3F0 131 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 PRADC1Q9BSG0 188 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 SPANXB1Q9NS25 103 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 NCOR2Q9Y618 2525 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
PCDHGA11-202ENST00000518882 IGHV1-69DA0A0B4J2H0 117 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 LINC01619G3V211 115 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 IGHV1-69P01742 117 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 UCNP55089 124 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 LY6EQ16553 131 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 RRN3P1Q2M238 152 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.41
PCDHGA11-202ENST00000518882 F8W1H4 67 aa12.46□□□□□ -0.42
PCDHGA11-202ENST00000518882 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 CRYGDP07320 174 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 MED14OSP0DP75 135 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 SRD5A1P18405 259 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 EDN2P20800 178 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 ITPR1Q14643 2758 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 LINC00315P59091 139 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 Q6ZS46 218 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 PLEKHB2Q96CS7 222 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 JPT2Q9H910 190 aa12.45□□□□□ -0.42
PCDHGA11-202ENST00000518882 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 KIF25-AS1Q9Y6Z4 181 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 TSHBP01222 138 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 RHPN1-AS1Q9BWJ2 59 aa12.44□□□□□ -0.42
PCDHGA11-202ENST00000518882 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
PCDHGA11-202ENST00000518882 COX6B1P14854 86 aa12.43□□□□□ -0.42
PCDHGA11-202ENST00000518882 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
PCDHGA11-202ENST00000518882 POM121L12Q8N7R1 296 aa12.43□□□□□ -0.42
PCDHGA11-202ENST00000518882 PRO0461Q9UI25 63 aa12.43□□□□□ -0.42
PCDHGA11-202ENST00000518882 NXPH4O95158 308 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 PF4V1P10720 104 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 EMP1P54849 157 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 BLCAPP62952 87 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 WFDC12Q8WWY7 111 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGHG2P01859 326 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 LY6DQ14210 128 aa12.42□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 USMG5Q96IX5 58 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGHV4-61A0A0C4DH41 118 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 H3BUX3 64 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 HOXA3O43365 443 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 CD300EQ496F6 205 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 TSSC4Q9Y5U2 329 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA11-202ENST00000518882 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 SPAG8Q99932 426 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGIPA6NJ69 53 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 KLLNB2CW77 178 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 PPP1R17O96001 155 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 SUMO4Q6EEV6 95 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
PCDHGA11-202ENST00000518882 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 A0A087WW49 117 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 A0A087WWL8 130 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 ZFP2Q6ZN57 461 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 A6NDX4 124 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 H3BUA1 57 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 BRI3O95415 125 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 INSL3P51460 131 aa12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
PCDHGA11-202ENST00000518882 AZU1P20160 251 aa12.38□□□□□ -0.43
PCDHGA11-202ENST00000518882 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 UBE2D1P51668 147 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 FAM159AQ6UWV7 190 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
PCDHGA11-202ENST00000518882 TRAV12-3A0A0B4J271 114 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms