RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 PLAC8Q9NZF1 115 aa0.55□□□□□ -2.32
RNU6-390P-201ENST00000516259 ERG28Q9UKR5 140 aa0.55□□□□□ -2.32
RNU6-390P-201ENST00000516259 NOP16Q9Y3C1 178 aaKnown RBP0.55□□□□□ -2.32
RNU6-390P-201ENST00000516259 DLEC1Q9Y238 1755 aa0.55□□□□□ -2.32
RNU6-390P-201ENST00000516259 ATG2AQ2TAZ0 1938 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 TRAV12-2A0A075B6T6 113 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 HIST1H1AQ02539 215 aaPredicted RBP0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 ZNF56Q15929 161 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 LZICQ8WZA0 190 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 TMEM14BQ9NUH8 114 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 PAIP2BQ9ULR5 123 aaKnown RBP0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 LSM2Q9Y333 95 aaKnown RBP0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 BCORL1Q5H9F3 1711 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 ZNF462Q96JM2 2506 aa0.54□□□□□ -2.32
RNU6-390P-201ENST00000516259 NINQ8N4C6 2090 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 ADGRB1O14514 1584 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 ZNF142P52746 1687 aaPredicted RBP0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 IGLC6P0CF74 106 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 CLLU1Q5K131 121 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 C6orf52Q5T4I8 152 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 MAFIPQ8WZ33 124 aa0.53□□□□□ -2.32
RNU6-390P-201ENST00000516259 PLXNA2O75051 1894 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 HELZP42694 1942 aaKnown RBP0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 SPTBP11277 2137 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 J3QR89 54 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 SMIM21Q3B7S5 101 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 OR2T2Q6IF00 324 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 COPZ2Q9P299 210 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 PTPRMP28827 1452 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 RREB1Q92766 1687 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 KNTC1P50748 2209 aa0.52□□□□□ -2.33
RNU6-390P-201ENST00000516259 PYYP10082 97 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 SPINK7P58062 85 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 SMCO1Q147U7 214 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 VIRMAQ69YN4 1812 aaKnown RBP0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 SCIMPQ6UWF3 145 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 CTAGE3PQ8IX95 158 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 VSTM2AQ8TAG5 236 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 TRPM7Q96QT4 1865 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 FAM103A1Q9BTL3 118 aaKnown RBP0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 COA4Q9NYJ1 87 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 BET1LQ9NYM9 111 aa0.51□□□□□ -2.33
RNU6-390P-201ENST00000516259 ERCC6Q03468 1493 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 TMEM2Q9UHN6 1383 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 TRAV17A0A0B4J275 112 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 FXYD1O00168 92 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 LY6G6CO95867 125 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 SLC25A6P12236 298 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 IQCJQ1A5X6 159 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 TENM3Q9P273 2699 aa0.5□□□□□ -2.33
RNU6-390P-201ENST00000516259 SYNJ1O43426 1573 aa0.49□□□□□ -2.33
RNU6-390P-201ENST00000516259 M0R2Z0 102 aa0.49□□□□□ -2.33
RNU6-390P-201ENST00000516259 AFDNP55196 1824 aaKnown RBP0.49□□□□□ -2.33
RNU6-390P-201ENST00000516259 MAP2P11137 1827 aaKnown RBP0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 CASZ1Q86V15 1759 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 FAM236AA0A1B0GUQ0 79 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 FAM236BA0A1B0GV22 79 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 PRH1P02810 166 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 LINC00694P0DN24 101 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 S100A12P80511 92 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 EMX2Q04743 252 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 LINC01545Q5VT33 79 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 TMEM141Q96I45 108 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 DSCR8Q96T75 97 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 SMIM3Q9BZL3 60 aa0.48□□□□□ -2.33
RNU6-390P-201ENST00000516259 DAPK1P53355 1430 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 RBAKDNA6NC62 111 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 SSBP1Q04837 148 aaKnown RBP0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 SPANXN1Q5VSR9 72 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 TCEAL4Q96EI5 215 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 PFDN5Q99471 154 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 TPT1P8Q9HAU6 139 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 ESPL1Q14674 2120 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 MYOM3Q5VTT5 1437 aa0.47□□□□□ -2.33
RNU6-390P-201ENST00000516259 TCRBV3S1A0A5B6 114 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 ZNF670-ZNF695F2Z2N8 137 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 NPFFO15130 113 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 CCL3L1P16619 93 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 SPCS2Q15005 226 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 CYP2G1PQ6ZSU1 146 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 SMR3AQ99954 134 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 TMEM191AQ9H0A3 160 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 CDK13Q14004 1512 aaKnown RBP0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 LAMB1P07942 1786 aa0.46□□□□□ -2.34
RNU6-390P-201ENST00000516259 PITX3O75364 302 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 COX4I1P13073 169 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 ELOF1P60002 83 aaKnown RBP0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 RPS25P62851 125 aaKnown RBP0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 Q6ZUT4 128 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 TSKUQ8WUA8 353 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 IFI27L1Q96BM0 104 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 NDUFA12Q9UI09 145 aa0.45□□□□□ -2.34
RNU6-390P-201ENST00000516259 GRIN2AQ12879 1464 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 APCP25054 2843 aa0.44□□□□□ -2.34
RNU6-390P-201ENST00000516259 ABCA4P78363 2273 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms