RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 LINC01619G3V211 115 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 Q8NFD4 153 aa10.43□□□□□ -0.74
TCOF1-214ENST00000515035 A0A0J9YXV3 536 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 IGHV1-69P01742 117 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 HERV-K104P63124 156 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 IGHV7-4-1A0A0J9YVY3 117 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
TCOF1-214ENST00000515035 IGF2-ASQ6U949 168 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 ZFP2Q6ZN57 461 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 RNF114Q9Y508 228 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 MUC6Q6W4X9 2439 aa10.42□□□□□ -0.74
TCOF1-214ENST00000515035 IGF2BP2-AS1Q96M15 143 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 H0YGX0 51 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 PSMB8P28062 276 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 RBAKDNA6NC62 111 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 GP9P14770 177 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 XCL1P47992 114 aa10.41□□□□□ -0.74
TCOF1-214ENST00000515035 TNCP24821 2201 aa10.4□□□□□ -0.74
TCOF1-214ENST00000515035 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
TCOF1-214ENST00000515035 MED13Q9UHV7 2174 aa10.4□□□□□ -0.75
TCOF1-214ENST00000515035 TRAV4A0A0B4J268 109 aa10.4□□□□□ -0.75
TCOF1-214ENST00000515035 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.75
TCOF1-214ENST00000515035 PLXNA2O75051 1894 aa10.39□□□□□ -0.75
TCOF1-214ENST00000515035 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
TCOF1-214ENST00000515035 A0A096LPF7 62 aa10.39□□□□□ -0.75
TCOF1-214ENST00000515035 PTH2Q96A98 100 aa10.39□□□□□ -0.75
TCOF1-214ENST00000515035 GTF3C1Q12789 2109 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-214ENST00000515035 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 PLXND1Q9Y4D7 1925 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 TRBV10-2A0A0K0K1G8 114 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 IGLV1-44P01699 117 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 PATE2Q6UY27 113 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 Q96MF0 132 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 KIAA1671Q9BY89 1806 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 FAM215AQ9Y5M1 114 aa10.38□□□□□ -0.75
TCOF1-214ENST00000515035 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 H3BT86 120 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
TCOF1-214ENST00000515035 DEFB105AQ8NG35 78 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 FRMPD3Q5JV73 1810 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 ZFHX2Q9C0A1 2572 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-214ENST00000515035 E9PLD3 99 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 WFDC9Q8NEX5 89 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 U3KQE9 123 aa10.37□□□□□ -0.75
TCOF1-214ENST00000515035 J3QLI3 93 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 HELZP42694 1942 aaKnown RBP10.36□□□□□ -0.75
TCOF1-214ENST00000515035 NDUFS5O43920 106 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 CRYGBP07316 175 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 IGKV1-17P01599 117 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 DAND5Q8N907 189 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 COX7B2Q8TF08 81 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 IGFBPL1Q8WX77 278 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 RNF183Q96D59 192 aa10.36□□□□□ -0.75
TCOF1-214ENST00000515035 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-214ENST00000515035 FAM167A-AS1Q96KT0 104 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 KAAG1Q9UBP8 84 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 LGALS9O00182 355 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 ODF1Q14990 250 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
TCOF1-214ENST00000515035 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
TCOF1-214ENST00000515035 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 ANAPC1Q9H1A4 1944 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 HIST2H2BCQ6DN03 193 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 C22orf46C9J442 243 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 IGHV4-28A0A0C4DH34 117 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 LYPD6Q86Y78 171 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
TCOF1-214ENST00000515035 C2orf70A6NJV1 201 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 IGFL2Q6UWQ7 119 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
TCOF1-214ENST00000515035 MP68P56378 58 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 Q6ZUT4 128 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 NOTCH4Q99466 2003 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 I3L2K1 104 aa10.33□□□□□ -0.76
TCOF1-214ENST00000515035 FGF23Q9GZV9 251 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-214ENST00000515035 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 K7EIM0 57 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 LECT2O14960 151 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 NREPQ16612 68 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 NUP210Q8TEM1 1887 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-214ENST00000515035 WT1P19544 449 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-214ENST00000515035 VSIG2Q96IQ7 327 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 KMT2EQ8IZD2 1858 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 BRK1Q8WUW1 75 aa10.32□□□□□ -0.76
TCOF1-214ENST00000515035 MAPK1IP1LQ8NDC0 245 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 BDP1A6H8Y1 2624 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 H3BUA1 57 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 ELANEP08246 267 aa10.31□□□□□ -0.76
TCOF1-214ENST00000515035 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms