RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IFNA7P01567 189 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 EVI2AP22794 236 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 PPT1P50897 306 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 ERVFC1-1P60608 527 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 COX8CQ7Z4L0 72 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 HIST1H2BAQ96A08 127 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 MAP1LC3BQ9GZQ8 125 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
HMGXB3-205ENST00000514469 SMLR1H3BR10 107 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 MGST1P10620 155 aaKnown RBP7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 ZNF345Q14585 488 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 PIK3CD-AS1Q5SR53 167 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 ZC2HC1AQ96GY0 325 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 TCEAL7Q9BRU2 100 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
HMGXB3-205ENST00000514469 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 TRBV6-1A0A0K0K1D8 114 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 FABP5P3A8MUU1 101 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 EREGO14944 169 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 CRYGDP07320 174 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 LINC00694P0DN24 101 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 ASIPP42127 132 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 FHITP49789 147 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 DNLZQ5SXM8 178 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 ZFP2Q6ZN57 461 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 KCNRGQ8N5I3 272 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 FMC1Q96HJ9 113 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 PARLQ9H300 379 aa7.06□□□□□ -1.28
HMGXB3-205ENST00000514469 A0A087WTM6 91 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 A8MWV9 139 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 B4DEV8 164 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 KRBOX1C9JBD0 128 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 S100A4P26447 101 aaKnown RBP7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 CRIP1P50238 77 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 UBE2G1P62253 170 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 PGPEP1Q9NXJ5 209 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 IL36BQ9NZH7 164 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 ZFP30Q9Y2G7 519 aa7.05□□□□□ -1.28
HMGXB3-205ENST00000514469 TRAV8-6A0A0B4J262 113 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 HMSDA8MTL9 139 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 H3BVH4 76 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 SH2D1AO60880 128 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 LTAP01374 205 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 SEC11BP0C7V7 166 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 ZNF674Q2M3X9 581 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 FAM162BQ5T6X4 162 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 LELP1Q5T871 98 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 Q6ZSN1 163 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 Q8N1X5 172 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 OR11H4Q8NGC9 324 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 STOML3Q8TAV4 291 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 GTSF1LQ9H1H1 148 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 BOLA1Q9Y3E2 137 aa7.04□□□□□ -1.28
HMGXB3-205ENST00000514469 M0R036 132 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 BCL2L11O43521 198 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 AKR1C3P42330 323 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 LGALSLQ3ZCW2 172 aaPredicted RBP7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 LINC01559Q495D7 138 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 OR10J3Q5JRS4 329 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 ATP6V0E2Q8NHE4 81 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 MBD3L1Q8WWY6 194 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 JPT2Q9H910 190 aa7.03□□□□□ -1.28
HMGXB3-205ENST00000514469 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 UMAD1C9J7I0 102 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 PAGE4O60829 102 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 DMRTA1Q5VZB9 504 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 CST9LP1Q5W188 147 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 SYT8Q8NBV8 401 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 FAM213BQ8TBF2 198 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 SAMD10Q9BYL1 202 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 SCRT2Q9NQ03 307 aa7.02□□□□□ -1.29
HMGXB3-205ENST00000514469 A0A0D9SG52 128 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 KANTRA0A1W2PQU2 76 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 RHODO00212 210 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GAGE1Q13065 139 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GAGE4Q13068 117 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GAGE5Q13069 117 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 LAGE3Q14657 143 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 GAGE13Q4V321 117 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 C14orf178Q8N769 122 aaPredicted RBP7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 SFT2D1Q8WV19 159 aa7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 ZNF471Q9BX82 626 aaPredicted RBP7.01□□□□□ -1.29
HMGXB3-205ENST00000514469 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 TMSB15BA0A087X1C1 80 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 A0A1B0GV50 99 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 LRCOL1A6NCL2 159 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 IGHV3-30P01768 117 aa7□□□□□ -1.29
HMGXB3-205ENST00000514469 IGHV3-33P01772 117 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms