RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TMEM30CPA0ZSE6 113 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM238C9JI98 176 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PGRMC1O00264 195 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 CDC42EP2O14613 210 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 CREBL2O60519 120 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PITX3O75364 302 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 IGKV1-17P01599 117 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 IGKV1-16P04430 117 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 OR4E1P0C645 316 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 OR13C7P0DN81 318 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 HIST1H1BP16401 226 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PPP1CCP36873 323 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 GABARAPL2P60520 117 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PSME3P61289 254 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 HLA-DRB3P79483 266 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 RPL19P84098 196 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 IFITM2Q01629 132 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 KISS1Q15726 138 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 ASB16-AS1Q495Z4 193 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PRR9Q5T870 116 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 ATP5L2Q7Z4Y8 100 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 WFDC10BQ8IUB3 73 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 OR2T4Q8NH00 348 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 BORCS7Q96B45 105 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 DIRAS2Q96HU8 199 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 PYURFQ96I23 114 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 ERMAPQ96PL5 475 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 CMSS1Q9BQ75 279 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 GNB1LQ9BYB4 327 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 GPR84Q9NQS5 396 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 DOK5Q9P104 306 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 ICOSQ9Y6W8 199 aa1.82□□□□□ -2.12
TOPBP1-208ENST00000511439 TGIF2-C20orf24A0A0A6YYL0 155 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 EVPLLA8MZ36 301 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 IBA57-AS1B1ANH7 110 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 H3BMM0 161 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 K7ERS5 55 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 ZNF682O95780 498 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 LTAP01374 205 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 APOA2P02652 100 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 CD36P16671 472 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 PHBP35232 272 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 RBP2P50120 134 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 FXYD7P58549 80 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 POLR2GP62487 172 aaKnown RBP eCLIP1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM241Q24JQ0 296 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 MORN2Q502X0 79 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 PSMG4Q5JS54 123 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 HACD4Q5VWC8 232 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM75Q8N9X5 138 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 FER1L6-AS1Q8NA97 138 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 OR4K13Q8NH42 304 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 ACOT12Q8WYK0 555 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 MARVELD1Q9BSK0 173 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 MED28Q9H204 178 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 DCSTAMPQ9H295 470 aa1.81□□□□□ -2.12
TOPBP1-208ENST00000511439 TRAV14DV4A0A0A6YYC5 116 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 AIPO00170 330 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 MT-CO2P00403 227 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 FABP1P07148 127 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 OR5AC1P0C628 307 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 DEFA4P12838 97 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 HLA-DRB4P13762 266 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 ORM2P19652 201 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 NTF3P20783 257 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 CRHBPP24387 322 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 OR10J1P30954 320 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 SNRPD3P62318 126 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 HERVK_113P63121 156 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 PMAIP1Q13794 54 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 KRTAP19-6Q3LI70 58 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 SP6Q3SY56 376 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 EBLN2Q6P2I7 272 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 LYPD5Q6UWN5 251 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 AKAP14Q86UN6 197 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 ATP6V0E2Q8NHE4 81 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 ZC2HC1AQ96GY0 325 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 ABHD14BQ96IU4 210 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 NIPSNAP1Q9BPW8 284 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 SHANK2-AS3Q9BTD1 123 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 ZNF492Q9P255 531 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 JPT1Q9UK76 154 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 CARHSP1Q9Y2V2 147 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 TIMM8BQ9Y5J9 83 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 V9GYS6 101 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 HLA-DRB4X5D2U9 266 aa1.8□□□□□ -2.12
TOPBP1-208ENST00000511439 IGHV3-21A0A0B4J1V1 117 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TRAV1-1A0A0B4J248 108 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM269A0A1B0GVZ9 245 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 A6NIN4 97 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TMEM14DPA8MWL7 114 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 MRASO14807 208 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 NAPSAO96009 420 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 TTRP02766 147 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 ATP6V0CP27449 155 aa1.79□□□□□ -2.12
TOPBP1-208ENST00000511439 G0S2P27469 103 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 338.9 ms