RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 SRRM5B3KS81 715 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 LOXP28300 417 aaPredicted RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 TMEM30BQ3MIR4 351 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 DUX4L9Q6RFH8 374 aaPredicted RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 LINC00528Q8N1L1 170 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 CD177Q8N6Q3 437 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 ARFGEF3Q5TH69 2177 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 HRNRQ86YZ3 2850 aaPredicted RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 TRAV2A0A0B4J234 112 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 SAA2P0DJI9 122 aaPredicted RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 ERHP84090 104 aaKnown RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 AAMDCQ9H7C9 122 aa4.74□□□□□ -1.65
KDM3B-204ENST00000507996 USP9XQ93008 2570 aaPredicted RBP4.74□□□□□ -1.65
KDM3B-204ENST00000507996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.652e-7■■■■■ 31.2
KDM3B-204ENST00000507996 IGKV1D-17A0A075B6S4 117 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 FAM216BQ8N7L0 139 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 DCTN5Q9BTE1 182 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 GNG12Q9UBI6 72 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 TACC2O95359 2948 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 USP9YO00507 2555 aaPredicted RBP4.73□□□□□ -1.65
KDM3B-204ENST00000507996 TRAV8-1A0A0A6YYK1 113 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 Q71RC1 249 aaPredicted RBP4.73□□□□□ -1.65
KDM3B-204ENST00000507996 WFDC3Q8IUB2 231 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 HELZ2Q9BYK8 2649 aaKnown RBP4.73□□□□□ -1.65
KDM3B-204ENST00000507996 LINC00574Q9H8X3 128 aa4.73□□□□□ -1.65
KDM3B-204ENST00000507996 TMEM178BH3BS89 294 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 LHBP01229 141 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CFC1P0CG37 223 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CRYGAP11844 174 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 GATA4P43694 442 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 HERVK_113P63121 156 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 DTX2Q86UW9 622 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 AGRNO00468 2067 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 TRBV10-2A0A0K0K1G8 114 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 F8WDY8 70 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 TMEM170BQ5T4T1 132 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 FLYWCH2Q96CP2 140 aaKnown RBP4.72□□□□□ -1.65
KDM3B-204ENST00000507996 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 DSCAMO60469 2012 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CSMD2Q7Z408 3487 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 TRBV19A0A075B6N1 114 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CGB1A6NKQ9 187 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 H3BMM0 161 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 H3BVH4 76 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 CRYGDP07320 174 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 SAA1P0DJI8 122 aaPredicted RBP4.72□□□□□ -1.65
KDM3B-204ENST00000507996 LAGE3Q14657 143 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 LYPD2Q6UXB3 125 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 SIGLEC15Q6ZMC9 328 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 IL17RELQ6ZVW7 336 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 NEXN-AS1Q8NBZ9 246 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 KIR2DL5BQ8NHK3 375 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 NTN5Q8WTR8 489 aaPredicted RBP4.72□□□□□ -1.65
KDM3B-204ENST00000507996 UBE2WQ96B02 151 aa4.72□□□□□ -1.65
KDM3B-204ENST00000507996 MRPL36Q9P0J6 103 aaKnown RBP4.72□□□□□ -1.65
KDM3B-204ENST00000507996 RAI1Q7Z5J4 1906 aaPredicted RBP4.71□□□□□ -1.66
KDM3B-204ENST00000507996 A0A0J9YY99 117 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 H3BT86 120 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 J3QKU1 62 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 SH2D1AO60880 128 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ATXN8Q156A1 80 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 C17orf58Q2M2W7 97 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 HIST2H2BCQ6DN03 193 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 SDIM1Q6ZPB5 146 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 VPS13CQ709C8 3753 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 DOPEY1Q5JWR5 2465 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ACYP1P07311 99 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 PLA2G2AP14555 144 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 GAFA1Q96PS6 74 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ABCA2Q9BZC7 2435 aa4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ASH1LQ9NR48 2969 aaKnown RBP4.71□□□□□ -1.66
KDM3B-204ENST00000507996 ZNF815PA8K554 130 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 NDUFB3O43676 98 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 IGHV3-33P01772 117 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 CXCL5P42830 114 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 EFNA4P52798 201 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 MFAP4P55083 255 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 WT1-ASQ06250 92 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 ZNF833PQ6ZTB9 187 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 NRACQ8N912 160 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 PLEKHB2Q96CS7 222 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 PRR25Q96S07 402 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 CCL19Q99731 98 aa4.7□□□□□ -1.66
KDM3B-204ENST00000507996 SONP18583 2426 aaKnown RBP4.7□□□□□ -1.66
KDM3B-204ENST00000507996 SETD2Q9BYW2 2564 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms