RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 hDV103S1A0JD37 113 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1D-33P01593 117 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1-33P01594 117 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 COX6B1P14854 86 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 LINC01590Q5TEZ4 76 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 NYNRINQ9P2P1 1898 aaKnown RBP4.74□□□□□ -1.65
CLCN3-204ENST00000504131 Q6P435 159 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 TMEM105Q8N8V8 129 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 PRRC2BQ5JSZ5 2229 aaKnown RBP4.74□□□□□ -1.65
CLCN3-204ENST00000504131 ANKRD36A6QL64 1941 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 DOCK7Q96N67 2140 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 JMJD7-PLA2G4BH0Y9G9 81 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 CRIPAKQ8N1N5 446 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 FAM168AQ92567 244 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1D-42A0A075B6H8 117 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 IGHV1-18A0A0C4DH31 117 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 K7ENP7 123 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 MAPKAPK5-AS1Q8N8E1 139 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 SCN3AQ9NY46 2000 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 IGLV1-36A0A0B4J1U3 117 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 NREPQ16612 68 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 CNEP1R1Q8N9A8 125 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 HCFC1P51610 2035 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 CEP290O15078 2479 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 MYLKQ15746 1914 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 EIF4EBP3O60516 100 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-204ENST00000504131 Q96M66 194 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 MAP6D1Q9H9H5 199 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 MPDZO75970 2070 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 COL4A4P53420 1690 aaPredicted RBP4.73□□□□□ -1.65
CLCN3-204ENST00000504131 GNLYP22749 145 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 TRBV7-3A0A075B6L6 115 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 MRPL33O75394 65 aaKnown RBP4.73□□□□□ -1.65
CLCN3-204ENST00000504131 IGHV3-33P01772 117 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 NPPCP23582 126 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 PLA2G5P39877 138 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 DEFB112Q30KQ8 113 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 Q8IYB0 196 aa4.73□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1-5P01602 117 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 ZNF32P17041 273 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 DEFB108AA8MXU0 73 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 LY6LH3BQJ8 138 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 J3QL48 77 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 PRSS33Q8NF86 280 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 PLXNA1Q9UIW2 1896 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 HEATR5AQ86XA9 2040 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 BGLAPP02818 100 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 LINC01356Q8N9X3 169 aa4.72□□□□□ -1.65
CLCN3-204ENST00000504131 SDHAF1A6NFY7 115 aa4.71□□□□□ -1.65
CLCN3-204ENST00000504131 C9orf116Q5BN46 136 aaPredicted RBP4.71□□□□□ -1.65
CLCN3-204ENST00000504131 GDF5OSQ5U4N7 250 aa4.71□□□□□ -1.65
CLCN3-204ENST00000504131 X6R8D5 127 aa4.71□□□□□ -1.65
CLCN3-204ENST00000504131 NDUFB1O75438 58 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV1-69P01742 117 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 ZNF497Q6ZNH5 498 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 POM121L12Q8N7R1 296 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 CMC4P56277 68 aaPredicted RBP4.71□□□□□ -1.66
CLCN3-204ENST00000504131 C2orf66Q6UXQ4 117 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 LHFPL6Q9Y693 200 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 PATE3B3GLJ2 98 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 CD59P13987 128 aa4.71□□□□□ -1.66
CLCN3-204ENST00000504131 RPL36AP83881 106 aaKnown RBP4.71□□□□□ -1.66
CLCN3-204ENST00000504131 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
CLCN3-204ENST00000504131 FOXS1O43638 330 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 MYO16Q9Y6X6 1858 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 KNTC1P50748 2209 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 LINC00158P58513 81 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 KIAA0087Q14695 138 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 UNQ9165/PRO28630Q6UXU0 137 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 IMMP1LQ96LU5 166 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 LINC00313P59037 77 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 WFDC10AQ9H1F0 79 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 I3L3M4 83 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 MGAMO43451 1857 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-43A0A0B4J1X8 118 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV7-4-1A0A0J9YVY3 117 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-43DP0DP04 118 aa4.7□□□□□ -1.66
CLCN3-204ENST00000504131 ZNF71Q9NQZ8 489 aaPredicted RBP4.7□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-15A0A0B4J1V0 119 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 COL8A2P25067 703 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 H0YGX0 51 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-64DA0A0J9YX35 117 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 AVPP01185 164 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-204ENST00000504131 SPINK2P20155 84 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 TOMM7Q9P0U1 55 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 PDCD11Q14690 1871 aaKnown RBP4.69□□□□□ -1.66
CLCN3-204ENST00000504131 DOCK6Q96HP0 2047 aa4.69□□□□□ -1.66
CLCN3-204ENST00000504131 IGKV1-8A0A0C4DH67 115 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
CLCN3-204ENST00000504131 MCM3APO60318 1980 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-72A0A0B4J1Y9 119 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 C19orf71A6NCJ1 209 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 BPY2O14599 106 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 GTF3C1Q12789 2109 aa4.68□□□□□ -1.66
CLCN3-204ENST00000504131 IGHV3-20A0A0C4DH32 117 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms