RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IGLV3-32A0A0A0MS00 114 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 TRAV17A0A0B4J275 112 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 PVALEFA0A1B0GWK0 134 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 TRBV6-4A0A1B0GX49 114 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 FAM24AA6NFZ4 105 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 GYPBP06028 91 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 SLC25A6P12236 298 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 RNASE3P12724 160 aaKnown RBP1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 NPC2P61916 151 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 MPV17LQ2QL34 196 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 NDUFA11Q86Y39 141 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 TTC9CQ8N5M4 171 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 TSKUQ8WUA8 353 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 REG4Q9BYZ8 158 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 CDC42SE1Q9NRR8 79 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 MED9Q9NWA0 146 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 NDUFA12Q9UI09 145 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 SNURFQ9Y675 71 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 RB1CC1Q8TDY2 1594 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 LAMB2P55268 1798 aa1.03□□□□□ -2.24
HMGB1P35-201ENST00000503360 KIF13AQ9H1H9 1805 aa1.03□□□□□ -2.25
HMGB1P35-201ENST00000503360 PLXNA4Q9HCM2 1894 aa1.03□□□□□ -2.25
HMGB1P35-201ENST00000503360 NUMA1Q14980 2115 aa1.03□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRGV2A0A075B6R0 118 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 TCRBV3S1A0A5B6 114 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 OOSP1A8MZH6 123 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 M0R2N4 97 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 NCKAP5O14513 1909 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 ZNF609O15014 1411 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 INE1O15225 51 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 MRPS14O60783 128 aaKnown RBP1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 IGHV3-30P01768 117 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 IGHV3-30-5P0DP03 117 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 IL7P13232 177 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 CBLN1P23435 193 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 HELZP42694 1942 aaKnown RBP1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 DAPK1P53355 1430 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 S100A10P60903 97 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 LTBP2Q14767 1821 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 C9orf116Q5BN46 136 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 COL5A1-AS1Q5SY13 56 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 NCMAPQ5T1S8 102 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 LYPD5Q6UWN5 251 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 Q6ZRN7 208 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 C4orf33Q8N1A6 199 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 DMAC1Q96GE9 116 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 ATG5Q9H1Y0 275 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 SCN3AQ9NY46 2000 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 MRPL36Q9P0J6 103 aaKnown RBP1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 TMEM14CQ9P0S9 112 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 C22orf24Q9Y442 160 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 TENM1Q9UKZ4 2725 aa1.02□□□□□ -2.25
HMGB1P35-201ENST00000503360 BAZ2BQ9UIF8 2168 aaKnown RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 FREM3P0C091 2139 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 KIAA1549Q9HCM3 1950 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 ANKRD26Q9UPS8 1709 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 SHROOM2Q13796 1616 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 CECR2Q9BXF3 1484 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 RAPGEF2Q9Y4G8 1499 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 TROQ12816 1431 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 TRBV10-1A0A0K0K1A3 114 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 CXorf51AA0A1B0GTR3 108 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 TMEM262E9PQX1 116 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 JMJD7-PLA2G4BH0Y9G9 81 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 H3BQ15 152 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 UBE2G1P62253 170 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 DCDP81605 110 aaKnown RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 SLC48A1Q6P1K1 146 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 CSAG1Q6PB30 78 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 Q8N8P6 123 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 C10orf105Q8TEF2 133 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 TMEM106BQ9NUM4 274 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 MYH9P35579 1960 aaKnown RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 PCDH15Q96QU1 1955 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 AKAP12Q02952 1782 aa1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 ZFHX2Q9C0A1 2572 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P35-201ENST00000503360 NRKQ7Z2Y5 1582 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 ICE1Q9Y2F5 2266 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 MUC4Q99102 2169 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 MDC1Q14676 2089 aaKnown RBP1□□□□□ -2.25
HMGB1P35-201ENST00000503360 LOC110117498A0A087WWA1 95 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 UBE2L5PA0A1B0GUS4 154 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 NUPR2A6NF83 97 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 SSSCA1O60232 199 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 PPYP01298 95 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 IGKCP01834 107 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 CCKP06307 115 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 LINC00032P0C843 101 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 PDE6GP18545 87 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 ATP5EP56381 51 aaPredicted RBP1□□□□□ -2.25
HMGB1P35-201ENST00000503360 UBE2L3P68036 154 aaKnown RBP1□□□□□ -2.25
HMGB1P35-201ENST00000503360 IQCJQ1A5X6 159 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 SPATA45Q537H7 98 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 LINC00322Q6ZN03 302 aaPredicted RBP1□□□□□ -2.25
HMGB1P35-201ENST00000503360 C5orf38Q86SI9 138 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 DPH3P1Q9H4G8 78 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 AP4S1Q9Y587 144 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 KIAA1549LQ6ZVL6 1849 aa1□□□□□ -2.25
HMGB1P35-201ENST00000503360 FN1P02751 2386 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms