RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PAPPAQ13219 1627 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 A0A0J9YXY3 114 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 C19orf71A6NCJ1 209 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 C16orf90A8MZG2 172 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 B4DSR2 109 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 IGHV3-13P01766 116 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 XCL1P47992 114 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 DAZAP2Q15038 168 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-220ENST00000492859 PSMG4Q5JS54 123 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 Q6YL49 198 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 C7orf33Q8WU49 177 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 KLK15Q9H2R5 256 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 LAMA4Q16363 1823 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 KIAA1549LQ6ZVL6 1849 aa2.95□□□□□ -1.94
BRCA1-220ENST00000492859 MUC4Q99102 2169 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 TRAV3A0A0B4J244 114 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 IGHV3-35A0A0C4DH35 117 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 IGLV5-39A0A0G2JS06 123 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 C16orf97H3BN30 126 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 BCE1O60756 84 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 IGLV1-51P01701 117 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 FXYD2P54710 66 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 UBE2D3P61077 147 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 UBE2D2P62837 147 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 SUPT4H1P63272 117 aaKnown RBP2.94□□□□□ -1.94
BRCA1-220ENST00000492859 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 C10orf25Q5T742 122 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 SPANXN1Q5VSR9 72 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 FAM19A2Q8N3H0 131 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 SMIM4Q8WVI0 70 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 PPP1R1CQ8WVI7 109 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 ZNF414Q96IQ9 312 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 CAMK2N2Q96S95 79 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 DEC1Q9P2X7 70 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 BAZ2BQ9UIF8 2168 aaKnown RBP2.94□□□□□ -1.94
BRCA1-220ENST00000492859 ABCC8Q09428 1581 aa2.94□□□□□ -1.94
BRCA1-220ENST00000492859 UBR3Q6ZT12 1888 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 MYO7AQ13402 2215 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 MUC22E2RYF6 1773 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 TULP4Q9NRJ4 1543 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 LOC107984156A0A0G2JMH3 177 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 LINC01548A6NM66 108 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 IGHV3-30-3P0DP02 117 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 DPTQ07507 201 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 RNASE13Q5GAN3 156 aaKnown RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 NCBP2-AS2Q69YL0 99 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 SLC48A1Q6P1K1 146 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 CRIP3Q6Q6R5 217 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 ARL17AQ8IVW1 177 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 CNEP1R1Q8N9A8 125 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 WWC2-AS2Q96NR7 200 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 BPESC1Q9GZL8 116 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 GABARAPL1Q9H0R8 117 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 NHP2Q9NX24 153 aaKnown RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 ARHGEF17Q96PE2 2063 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 MYOFQ9NZM1 2061 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 FAM208AQ9UK61 1670 aaKnown RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 QSER1Q2KHR3 1735 aa2.93□□□□□ -1.94
BRCA1-220ENST00000492859 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-220ENST00000492859 CPS1P31327 1500 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 TRBV7-1A0A0A6YYK4 115 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 H3BMM0 161 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 SLC25A20O43772 301 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 NPYP01303 97 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 IGLV3-25P01717 112 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 NOVP48745 357 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 FXYD7P58549 80 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 C15orf32Q32M92 178 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 ZNF627Q7L945 461 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 VMO1Q7Z5L0 202 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 Q8IYB0 196 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 RPRMLQ8N4K4 120 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 Q8N814 137 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 DYNLRB2Q8TF09 96 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 UBE2WQ96B02 151 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 SMAD5-AS1Q9Y6J3 95 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 KIF21BO75037 1637 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 COL4A3Q01955 1670 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 RREB1Q92766 1687 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 MRC1P22897 1456 aa2.92□□□□□ -1.94
BRCA1-220ENST00000492859 COL16A1Q07092 1604 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-220ENST00000492859 C3P01024 1663 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 PIGBOS1A0A0B4J2F0 54 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 IQCF6A8MYZ5 107 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 C5orf67F2Z3F1 127 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 SOCS3O14543 225 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 IL4P05112 153 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 SMIM11AP58511 58 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 LY6G5CQ5SRR4 150 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 Q96M85 177 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 SMIM14Q96QK8 99 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 PROK2Q9HC23 129 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 PTPRSQ13332 1948 aa2.91□□□□□ -1.94
BRCA1-220ENST00000492859 TMSB15BA0A087X1C1 80 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms