RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 LELP1Q5T871 98 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 PRNTQ86SH4 94 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 SLC25A29Q8N8R3 303 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 TM2D2Q9BX73 214 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 GTSF1LQ9H1H1 148 aa5.92□□□□□ -1.46
NUP50-217ENST00000491860 VPS13BQ7Z7G8 4022 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 A0A087WWC5 75 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 IBA57-AS1B1ANH7 110 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 GGTLC3B5MD39 225 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 RHODO00212 210 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 EIF3GO75821 320 aaKnown RBP eCLIP5.91□□□□□ -1.46
NUP50-217ENST00000491860 IFNA7P01567 189 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 GCSHP23434 173 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 ASIPP42127 132 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 FGF8P55075 233 aaPredicted RBP5.91□□□□□ -1.46
NUP50-217ENST00000491860 ZNF506Q5JVG8 444 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 AKR1C8PQ5T2L2 129 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 ATP6V0E2Q8NHE4 81 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 FRZBQ92765 325 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 IL36BQ9NZH7 164 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 ZFP30Q9Y2G7 519 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
NUP50-217ENST00000491860 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 IGLV2-11P01706 119 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
NUP50-217ENST00000491860 ZNF80P51504 273 aaPredicted RBP5.9□□□□□ -1.46
NUP50-217ENST00000491860 STOML3Q8TAV4 291 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 SGK494Q96LW2 274 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 TMEM70Q9BUB7 260 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 TNFRSF18Q9Y5U5 241 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 ARL2-SNX15V9GYD0 113 aa5.9□□□□□ -1.46
NUP50-217ENST00000491860 FXYD6-FXYD2A0A087WZ82 144 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 IGLV5-52A0A0A0MRZ9 124 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 LOC100131303A0A0U1RQF7 123 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 PEX7O00628 323 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 C1QBP02746 253 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 FHITP49789 147 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 UBE2G1P62253 170 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 LGALSLQ3ZCW2 172 aaPredicted RBP5.89□□□□□ -1.47
NUP50-217ENST00000491860 DNLZQ5SXM8 178 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 COX8CQ7Z4L0 72 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 FMC1Q96HJ9 113 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 PARLQ9H300 379 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
NUP50-217ENST00000491860 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 TRBV6-1A0A0K0K1D8 114 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 RNF222A6NCQ9 220 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 B4DEV8 164 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 INAFM2P0DMQ5 153 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 FAM162BQ5T6X4 162 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 RPL7L1Q6DKI1 246 aaKnown RBP5.88□□□□□ -1.47
NUP50-217ENST00000491860 DPPA3Q6W0C5 159 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 Q86TA4 180 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 OR11H4Q8NGC9 324 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 OR2T35Q8NGX2 323 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 RMI2Q96E14 147 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 URGCP-MRPS24S4R325 110 aa5.88□□□□□ -1.47
NUP50-217ENST00000491860 IGHV3-73A0A0B4J1V6 119 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 IGKV3D-20A0A0C4DH25 116 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 FAM74A7A6NL05 159 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 S100A9P06702 114 aaKnown RBP5.87□□□□□ -1.47
NUP50-217ENST00000491860 XGP55808 180 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 KCNIP4Q6PIL6 250 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 Q8N814 137 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.87□□□□□ -1.47
NUP50-217ENST00000491860 CHCHD7Q9BUK0 85 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 Q9HAA7 133 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
NUP50-217ENST00000491860 TRAV34A0A0B4J273 112 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 MAP1LC3B2A6NCE7 125 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 UMAD1C9J7I0 102 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 KRBOX1C9JBD0 128 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 IGHV3-30P01768 117 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 IGHV3-33P01772 117 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 LINC00694P0DN24 101 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 IGHV3-30-3P0DP02 117 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 IGHV3-30-5P0DP03 117 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 TPT1P13693 172 aaKnown RBP5.86□□□□□ -1.47
NUP50-217ENST00000491860 UBE2G2P60604 165 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 ELOBQ15370 118 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 ZNF726P1Q15940 193 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 Q5VSD8 79 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 ZFP82Q8N141 532 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 LINC00479Q96M42 142 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 MAP1LC3BQ9GZQ8 125 aa5.86□□□□□ -1.47
NUP50-217ENST00000491860 GAGE12JA6NER3 117 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 H3BVH4 76 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 LTAP01374 205 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 ARMS2P0C7Q2 107 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 PKIAP61925 76 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 EIF5AP63241 154 aaKnown RBP5.85□□□□□ -1.47
NUP50-217ENST00000491860 GAGE1Q13065 139 aa5.85□□□□□ -1.47
NUP50-217ENST00000491860 GAGE4Q13068 117 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms