RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833		A0A0J9YX75	114 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	hDV102S1	A0JD36	115 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833		F8VRH5	84 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833		H0Y8G0	127 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833		H3BVH4	76 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833		K7EQG2	157 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV3-11	P01762	117 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	SMIM13	P0DJ93	91 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	ODF1	Q14990	250 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	RHOH	Q15669	191 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	VAMP3	Q15836	100 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	ANXA2R	Q3ZCQ2	193 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	IGFL4	Q6B9Z1	124 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	TRPT1	Q86TN4	253 aa	Known RBP	4.78	□□□□□ -1.64
FN1-223	ENST00000490833	ZNF575	Q86XF7	245 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	NRAC	Q8N912	160 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	TMEM158	Q8WZ71	300 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	LINC00467	Q9BRT7	94 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	KLK15	Q9H2R5	256 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.78	□□□□□ -1.64
FN1-223	ENST00000490833	DMXL2	Q8TDJ6	3036 aa		4.78	□□□□□ -1.64
FN1-223	ENST00000490833	FAM208B	Q5VWN6	2430 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGF2R	P11717	2491 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV1OR15-1	A0A075B7D0	117 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV3OR16-13	A0A075B7E8	117 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV3OR16-8	A0A075B7F1	116 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833		A0A096LNJ9	63 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833		A0A096LNT2	108 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV3-49	A0A0A0MS15	119 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV3-74	A0A0B4J1X5	117 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	CYSRT1	A8MQ03	144 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833		A8MWV9	139 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	RHOD	O00212	210 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV4-59	P01825	116 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	RNF224	P0DH78	156 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	MPV17L2	Q567V2	206 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833		Q5PR19	223 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	LYRM7	Q5U5X0	104 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	STPG4	Q8N801	248 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	OR4C5	Q8NGB2	326 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	OR5A1	Q8NGJ0	315 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	C4orf3	Q8WVX3	66 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	JMJD8	Q96S16	334 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	TIMM17A	Q99595	171 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	SPX	Q9BT56	116 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	MSRB1	Q9NZV6	116 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	LINC00527	Q9UJ94	153 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	ADGRG4	Q8IZF6	3080 aa		4.77	□□□□□ -1.65
FN1-223	ENST00000490833	ARHGAP32	A7KAX9	2087 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	TRBV27	A0A0K0K1C4	114 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	OR11H12	B2RN74	326 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	CD7	P09564	240 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV4-31	P0DP07	118 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	GCSH	P23434	173 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	OR11H1	Q8NG94	326 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	OR11H2	Q8NH07	326 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	RAX2	Q96IS3	184 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	DNAJC30	Q96LL9	226 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	C20orf173	Q96LM9	149 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	SPAG8	Q99932	426 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-223	ENST00000490833	FOXC2	Q99958	501 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	C11orf21	Q9P2W6	132 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	HHLA3	Q9XRX5	114 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.76	□□□□□ -1.65
FN1-223	ENST00000490833	BSN	Q9UPA5	3926 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	NBAS	A2RRP1	2371 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	ATM	Q13315	3056 aa		4.76	□□□□□ -1.65
FN1-223	ENST00000490833	ZFYVE26	Q68DK2	2539 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	GAGE10	A6NGK3	116 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	C9orf118	A6NHY6	69 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833		A8MTW9	85 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833		F5H697	171 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	SMKR1	H3BMG3	65 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833		I3L3M4	83 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833		K7EP13	123 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833		K7ERU9	68 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	NCR2	O95944	276 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	TRBV12-3	P01733	135 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	RNASE3	P12724	160 aa	Known RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	HOXD3	P31249	432 aa	Predicted RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	NMU	P48645	174 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	POLR2K	P53803	58 aa	Known RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	PMVK	Q15126	192 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	MAJIN	Q3KP22	176 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	KRTAP19-4	Q3LI73	84 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	TCTEX1D4	Q5JR98	221 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	ZC2HC1B	Q5TFG8	222 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	C2orf66	Q6UXQ4	117 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	LINC00173	Q6ZV60	143 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	ZNF843	Q8N446	348 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	C14orf178	Q8N769	122 aa	Predicted RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	C9orf85	Q96MD7	179 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	FAM110A	Q9BQ89	295 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	TM2D2	Q9BX73	214 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	CSTL1	Q9H114	145 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	TMEM160	Q9NX00	188 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	ZZEF1	O43149	2961 aa		4.75	□□□□□ -1.65
FN1-223	ENST00000490833	GCN1	Q92616	2671 aa	Known RBP	4.75	□□□□□ -1.65
FN1-223	ENST00000490833	IGHV3-16	A0A0C4DH30	117 aa		4.74	□□□□□ -1.65

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