RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CBLN4Q9NTU7 201 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 OR5AC2Q9NZP5 309 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CCDC167Q9P0B6 97 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CKLFQ9UBR5 152 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 NAT8Q9UHE5 227 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CACNA1DQ01668 2161 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 MPDZO75970 2070 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 MED12LQ86YW9 2145 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 CCDC168Q8NDH2 2452 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 DSPPQ9NZW4 1301 aa1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 NIPBLQ6KC79 2804 aaeCLIP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 INTS1Q8N201 2190 aaKnown RBP1.89□□□□□ -2.11
DEPDC1-204ENST00000489862 IGLV4-69A0A075B6H9 119 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGLV3-9A0A075B6K5 115 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGLV3-32A0A0A0MS00 114 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV3-15A0A0B4J1V0 119 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A0G2JND7 137 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 J3QKU1 62 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV3-7P01780 117 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 DBIP07108 87 aaKnown RBP1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IFI6P09912 130 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IGLC6P0CF74 106 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 BIKQ13323 160 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 VMA21Q3ZAQ7 101 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 Q6P435 159 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF705AQ6ZN79 300 aaPredicted RBP1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 SLC30A7Q8NEW0 376 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 DPY30Q9C005 99 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 BAIAP2Q9UQB8 552 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 MINOS1-NBL1R4GNA1 71 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 MYO9AB2RTY4 2548 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ANKHD1Q8IWZ3 2542 aaKnown RBP1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 NF1P21359 2839 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 CADP27708 2225 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 MTORP42345 2549 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ITPR3Q14573 2671 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ACANP16112 2415 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 CUBNO60494 3623 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A0J9YW62 118 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A1W2PQD3 144 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ARRDC5A6NEK1 342 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 IFNA10P01566 189 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 P0DMU3 169 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 FABP2P12104 132 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 S100A3P33764 101 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 AKR1C2P52895 323 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 TAS2R20P59543 309 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 RPS25P62851 125 aaKnown RBP1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF117Q03924 483 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 TFF3Q07654 80 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 DIAPH2-AS1Q14236 149 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 Q8NAQ8 132 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 Q8NDZ9 215 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 WFDC11Q8NEX6 87 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 OR5A1Q8NGJ0 315 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 CALML5Q9NZT1 146 aa1.88□□□□□ -2.11
DEPDC1-204ENST00000489862 SETD2Q9BYW2 2564 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 IGKV1D-42A0A075B6H8 117 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 TRGV5A0A0B4J1U4 118 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 FAM236AA0A1B0GUQ0 79 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 FAM236BA0A1B0GV22 79 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 M0R129 80 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 M0R2Z0 102 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 NDUFB2O95178 105 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 CRYGAP11844 174 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 MDKP21741 143 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 S100A4P26447 101 aaKnown RBP1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 SDC2P34741 201 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 XCL1P47992 114 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 DYNLT3P51808 116 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 WNT4P56705 351 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 HBBP68871 147 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 TAF9Q16594 264 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 LYZL2Q7Z4W2 148 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 KLF14Q8TD94 323 aaPredicted RBP1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 ISOC1Q96CN7 298 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 C14orf144Q96I85 54 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 LINC00470Q9BZP3 86 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 BCL2L10Q9HD36 194 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 OSTCQ9NRP0 149 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 SLC39A9Q9NUM3 307 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 EPDR1Q9UM22 224 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 MXRA5Q9NR99 2828 aa1.87□□□□□ -2.11
DEPDC1-204ENST00000489862 IGHV3OR16-8A0A075B7F1 116 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TRAV5A0A0B4J249 113 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 A0A1B0GVG6 124 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TMEM212A6NML5 194 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 B4DSR2 109 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TP53I11O14683 189 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 TCRAP04437 139 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 ZNF728P0DKX0 622 aa1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 LGALS3P17931 250 aaKnown RBP1.86□□□□□ -2.11
DEPDC1-204ENST00000489862 EVI2AP22794 236 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms